PlantSME Plant secondary metabolism enzyme database

Brachypodium distachyon (brachypodium_distachyon)

Imported from atlas release summary for Brachypodium distachyon.

2226
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 601 19 BAHD (251) View species results
Phenylpropanoid pathway 521 11 POD (255) View species results
Alkaloid pathway 505 20 NMT (102) View species results
Flavonoid pathway 276 11 UFGT (183) View species results
Rosmarinic acid pathway 162 7 C4H (56) View species results
Steroid pathway 161 12 SMT1/SMT2/SMT3 (67) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1816 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 406 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Bdis04G0001860.1 Flavonoid ANS/LDOX medium borderline
Bdis04G0052590.1 Flavonoid ANS/LDOX medium borderline
Bdis04G0052930.3 Flavonoid ANS/LDOX medium borderline
Bdis01G0089770.1 Flavonoid C4H low borderline
Bdis02G0035430.3 Flavonoid C4H medium borderline
Bdis02G0060900.1 Flavonoid C4H medium borderline
Bdis03G0013580.1 Flavonoid C4H low borderline
Bdis03G0050010.1 Flavonoid C4H medium borderline
Bdis04G0011210.1 Flavonoid C4H medium borderline
Bdis04G0011290.1 Flavonoid C4H medium borderline
Bdis05G0008830.1 Flavonoid C4H medium borderline
Bdis01G0004540.1 Flavonoid CHI medium pass
Bdis04G0005460.1 Flavonoid CHI low borderline
Bdis04G0005460.10 Flavonoid CHI low borderline
Bdis04G0005460.11 Flavonoid CHI low borderline
Bdis04G0005460.2 Flavonoid CHI low borderline
Bdis04G0005460.3 Flavonoid CHI low borderline
Bdis04G0005460.5 Flavonoid CHI low borderline
Bdis04G0005460.7 Flavonoid CHI low borderline
Bdis04G0005460.8 Flavonoid CHI low borderline
Bdis04G0005460.9 Flavonoid CHI low borderline
Bdis04G0053610.1 Flavonoid CHI medium pass
Bdis01G0015340.1 Flavonoid CHS medium pass
Bdis01G0030930.1 Flavonoid CHS medium pass
Bdis01G0051380.1 Flavonoid CHS low borderline
Bdis01G0057000.1 Flavonoid CHS medium pass
Bdis01G0060310.1 Flavonoid CHS medium pass
Bdis01G0062580.1 Flavonoid CHS medium pass
Bdis03G0032960.1 Flavonoid CHS medium pass
Bdis03G0052900.1 Flavonoid CHS medium pass
Bdis04G0021710.1 Flavonoid CHS medium pass
Bdis04G0021710.2 Flavonoid CHS medium pass
Bdis04G0026880.1 Flavonoid CHS low borderline
Bdis04G0029290.1 Flavonoid CHS medium pass
Bdis04G0029290.2 Flavonoid CHS medium pass
Bdis04G0029290.3 Flavonoid CHS medium pass
Bdis04G0033200.1 Flavonoid CHS medium pass
Bdis01G0043340.1 Flavonoid DFR medium borderline
Bdis01G0043350.1 Flavonoid DFR medium borderline
Bdis01G0055670.1 Flavonoid DFR medium borderline
Bdis02G0013990.1 Flavonoid DFR medium borderline
Bdis02G0016640.1 Flavonoid DFR medium borderline
Bdis02G0061330.1 Flavonoid DFR medium borderline
Bdis03G0007300.1 Flavonoid DFR medium borderline
Bdis03G0007300.2 Flavonoid DFR medium borderline
Bdis03G0007300.3 Flavonoid DFR medium borderline
Bdis03G0046420.1 Flavonoid DFR medium borderline
Bdis03G0064170.1 Flavonoid DFR medium pass
Bdis03G0064180.1 Flavonoid DFR medium pass
Bdis03G0064190.1 Flavonoid DFR medium borderline