PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo3g096370.1 Rosmarinic Acid RAS medium pass
Bo3g107020.1 Rosmarinic Acid RAS low borderline
Bo4g023960.1 Rosmarinic Acid RAS low borderline
Bo4g025400.1 Rosmarinic Acid RAS low borderline
Bo4g140770.1 Rosmarinic Acid RAS medium pass
Bo4g188910.1 Rosmarinic Acid RAS medium pass
Bo5g052140.1 Rosmarinic Acid RAS medium borderline
Bo5g126870.1 Rosmarinic Acid RAS low borderline
Bo6g064900.1 Rosmarinic Acid RAS medium pass
Bo6g086100.1 Rosmarinic Acid RAS low borderline
Bo6g119920.1 Rosmarinic Acid RAS low borderline
Bo7g003460.1 Rosmarinic Acid RAS medium pass
Bo7g016350.1 Rosmarinic Acid RAS low borderline
Bo7g038940.1 Rosmarinic Acid RAS low borderline
Bo7g061840.1 Rosmarinic Acid RAS low borderline
Bo7g073960.1 Rosmarinic Acid RAS low borderline
Bo7g100890.1 Rosmarinic Acid RAS low borderline
Bo7g117710.1 Rosmarinic Acid RAS low borderline
Bo8g069990.1 Rosmarinic Acid RAS low borderline
Bo8g081690.1 Rosmarinic Acid RAS low borderline
Bo9g015230.1 Rosmarinic Acid RAS low borderline
Bo9g027520.1 Rosmarinic Acid RAS medium pass
Bo9g175150.1 Rosmarinic Acid RAS low borderline
Bo01318s010.1 Rosmarinic Acid TAT medium pass
Bo11842s010.1 Rosmarinic Acid TAT medium pass
Bo1g017510.1 Rosmarinic Acid TAT medium pass
Bo1g017520.1 Rosmarinic Acid TAT medium pass
Bo1g036850.1 Rosmarinic Acid TAT medium pass
Bo1g056990.1 Rosmarinic Acid TAT medium pass
Bo1g057020.1 Rosmarinic Acid TAT medium pass
Bo2g002340.1 Rosmarinic Acid TAT low borderline
Bo2g042260.1 Rosmarinic Acid TAT medium pass
Bo2g096040.1 Rosmarinic Acid TAT medium pass
Bo3g024030.1 Rosmarinic Acid TAT medium pass
Bo3g034590.1 Rosmarinic Acid TAT low borderline
Bo3g041960.1 Rosmarinic Acid TAT medium pass
Bo3g165870.1 Rosmarinic Acid TAT medium pass
Bo3g166880.1 Rosmarinic Acid TAT medium pass
Bo3g166890.1 Rosmarinic Acid TAT medium pass
Bo4g025690.1 Rosmarinic Acid TAT low borderline
Bo4g149450.1 Rosmarinic Acid TAT low borderline
Bo4g151210.1 Rosmarinic Acid TAT low borderline
Bo4g188720.1 Rosmarinic Acid TAT low borderline
Bo5g021230.1 Rosmarinic Acid TAT low borderline
Bo5g069410.1 Rosmarinic Acid TAT low borderline
Bo5g132220.1 Rosmarinic Acid TAT medium pass
Bo6g056350.1 Rosmarinic Acid TAT medium pass
Bo6g080330.1 Rosmarinic Acid TAT medium pass
Bo6g125630.1 Rosmarinic Acid TAT medium pass
Bo7g003330.1 Rosmarinic Acid TAT medium pass