PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo1g039050.1 Rosmarinic Acid CPR medium pass
Bo1g059000.1 Rosmarinic Acid CPR medium pass
Bo2g167610.1 Rosmarinic Acid CPR low borderline
Bo3g037150.1 Rosmarinic Acid CPR low borderline
Bo3g055570.1 Rosmarinic Acid CPR medium pass
Bo3g175680.1 Rosmarinic Acid CPR medium pass
Bo3g175690.1 Rosmarinic Acid CPR medium pass
Bo3g175700.1 Rosmarinic Acid CPR medium pass
Bo5g104810.1 Rosmarinic Acid CPR low borderline
Bo7g073890.1 Rosmarinic Acid CPR low borderline
Bo7g101180.1 Rosmarinic Acid CPR medium pass
Bo7g109570.1 Rosmarinic Acid CPR medium pass
Bo7g114320.1 Rosmarinic Acid CPR medium pass
Bo8g036680.1 Rosmarinic Acid CPR low borderline
Bo8g081240.1 Rosmarinic Acid CPR medium pass
Bo9g022100.1 Rosmarinic Acid CPR low borderline
Bo1g084770.1 Rosmarinic Acid HPPR medium pass
Bo2g117980.1 Rosmarinic Acid HPPR low borderline
Bo5g016790.1 Rosmarinic Acid HPPR medium pass
Bo6g008190.1 Rosmarinic Acid HPPR medium pass
Bo6g080010.1 Rosmarinic Acid HPPR medium pass
Bo6g125830.1 Rosmarinic Acid HPPR medium pass
Bo8g030340.1 Rosmarinic Acid HPPR low borderline
Bo8g108090.1 Rosmarinic Acid HPPR medium pass
Bo8g108100.1 Rosmarinic Acid HPPR medium pass
Bo00703s080.1 Rosmarinic Acid PAL high pass
Bo03123s010.1 Rosmarinic Acid PAL medium pass
Bo2g005490.1 Rosmarinic Acid PAL medium pass
Bo4g030910.1 Rosmarinic Acid PAL high pass
Bo4g145690.1 Rosmarinic Acid PAL high pass
Bo4g186590.1 Rosmarinic Acid PAL high pass
Bo5g137560.1 Rosmarinic Acid PAL high pass
Bo5g137600.1 Rosmarinic Acid PAL medium pass
Bo6g067250.1 Rosmarinic Acid PAL high pass
Bo8g082620.1 Rosmarinic Acid PAL high pass
Bo01051s050.1 Rosmarinic Acid RAS medium pass
Bo1g006070.1 Rosmarinic Acid RAS low borderline
Bo1g006800.1 Rosmarinic Acid RAS low borderline
Bo1g016970.1 Rosmarinic Acid RAS low borderline
Bo1g055210.1 Rosmarinic Acid RAS medium pass
Bo1g059260.1 Rosmarinic Acid RAS low borderline
Bo1g078330.1 Rosmarinic Acid RAS medium pass
Bo1g078340.1 Rosmarinic Acid RAS medium pass
Bo2g026960.1 Rosmarinic Acid RAS low borderline
Bo2g086490.1 Rosmarinic Acid RAS low borderline
Bo2g127620.1 Rosmarinic Acid RAS low borderline
Bo2g165370.1 Rosmarinic Acid RAS low borderline
Bo3g019080.1 Rosmarinic Acid RAS low borderline
Bo3g034840.1 Rosmarinic Acid RAS low borderline
Bo3g093780.1 Rosmarinic Acid RAS low borderline