PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo4g154320.1 Alkaloid G8O/G8H medium borderline
Bo4g176390.1 Alkaloid G8O/G8H low borderline
Bo4g195610.1 Alkaloid G8O/G8H medium borderline
Bo4g195620.1 Alkaloid G8O/G8H medium borderline
Bo4g195670.1 Alkaloid G8O/G8H medium borderline
Bo4g195690.1 Alkaloid G8O/G8H medium borderline
Bo5g019450.1 Alkaloid G8O/G8H medium pass
Bo5g079960.1 Alkaloid G8O/G8H medium borderline
Bo5g111090.1 Alkaloid G8O/G8H low borderline
Bo5g111220.1 Alkaloid G8O/G8H medium borderline
Bo5g129180.1 Alkaloid G8O/G8H medium borderline
Bo6g056020.1 Alkaloid G8O/G8H low borderline
Bo6g086930.1 Alkaloid G8O/G8H medium borderline
Bo6g095040.1 Alkaloid G8O/G8H medium borderline
Bo7g011680.1 Alkaloid G8O/G8H low borderline
Bo7g045690.1 Alkaloid G8O/G8H medium borderline
Bo7g082600.1 Alkaloid G8O/G8H medium pass
Bo7g107030.1 Alkaloid G8O/G8H medium borderline
Bo8g024390.1 Alkaloid G8O/G8H medium borderline
Bo8g100020.1 Alkaloid G8O/G8H medium borderline
Bo8g100080.1 Alkaloid G8O/G8H low borderline
Bo8g107640.1 Alkaloid G8O/G8H medium borderline
Bo8g107710.1 Alkaloid G8O/G8H medium borderline
Bo9g011470.1 Alkaloid G8O/G8H medium borderline
Bo9g027440.1 Alkaloid G8O/G8H medium borderline
Bo9g094260.1 Alkaloid G8O/G8H medium borderline
Bo9g131960.1 Alkaloid G8O/G8H medium borderline
Bo9g171920.1 Alkaloid G8O/G8H medium borderline
Bo00842s010.1 Alkaloid GES medium pass
Bo00921s010.1 Alkaloid GES medium pass
Bo01561s010.1 Alkaloid GES medium pass
Bo01561s020.1 Alkaloid GES medium pass
Bo06739s010.1 Alkaloid GES medium pass
Bo10241s010.1 Alkaloid GES medium pass
Bo1g003490.1 Alkaloid GES low borderline
Bo1g022270.1 Alkaloid GES low borderline
Bo1g053300.1 Alkaloid GES medium pass
Bo1g053310.1 Alkaloid GES medium pass
Bo1g131190.1 Alkaloid GES low borderline
Bo2g041370.1 Alkaloid GES low borderline
Bo2g124500.1 Alkaloid GES low borderline
Bo2g136190.1 Alkaloid GES medium pass
Bo3g042210.1 Alkaloid GES medium pass
Bo3g044990.1 Alkaloid GES medium pass
Bo3g066230.1 Alkaloid GES low borderline
Bo3g066250.1 Alkaloid GES medium pass
Bo3g159860.1 Alkaloid GES low borderline
Bo4g070550.1 Alkaloid GES medium pass
Bo4g085160.1 Alkaloid GES medium pass
Bo4g086590.1 Alkaloid GES medium pass