PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo4g086600.1 Alkaloid GES medium pass
Bo5g129140.1 Alkaloid GES medium pass
Bo6g079460.1 Alkaloid GES medium pass
Bo6g123900.1 Alkaloid GES medium pass
Bo7g064840.1 Alkaloid GES medium pass
Bo7g082080.1 Alkaloid GES medium pass
Bo7g082140.1 Alkaloid GES medium pass
Bo7g082180.1 Alkaloid GES medium pass
Bo7g082200.1 Alkaloid GES medium pass
Bo7g097340.1 Alkaloid GES medium pass
Bo7g098710.1 Alkaloid GES medium pass
Bo7g106990.1 Alkaloid GES low borderline
Bo7g107050.1 Alkaloid GES medium pass
Bo7g118660.1 Alkaloid GES low borderline
Bo8g045810.1 Alkaloid GES medium pass
Bo8g045830.1 Alkaloid GES medium pass
Bo8g100000.1 Alkaloid GES medium pass
Bo9g006080.1 Alkaloid GES low borderline
Bo9g014620.1 Alkaloid GES medium pass
Bo9g040980.1 Alkaloid GES low borderline
Bo9g042310.1 Alkaloid GES medium pass
Bo9g054610.1 Alkaloid GES medium pass
Bo9g061470.1 Alkaloid GES low borderline
Bo01359s010.1 Alkaloid GS low borderline
Bo04166s010.1 Alkaloid GS medium pass
Bo05850s010.1 Alkaloid GS low borderline
Bo1g002480.1 Alkaloid GS low borderline
Bo1g003230.1 Alkaloid GS high pass
Bo1g003240.1 Alkaloid GS high pass
Bo1g007500.1 Alkaloid GS high pass
Bo1g007510.1 Alkaloid GS high pass
Bo1g024300.1 Alkaloid GS low borderline
Bo1g067270.1 Alkaloid GS low borderline
Bo2g037580.1 Alkaloid GS low borderline
Bo2g037590.1 Alkaloid GS low borderline
Bo3g023520.1 Alkaloid GS low borderline
Bo3g053110.1 Alkaloid GS low borderline
Bo3g066570.1 Alkaloid GS low borderline
Bo3g103230.1 Alkaloid GS medium pass
Bo3g153050.1 Alkaloid GS high pass
Bo3g153060.1 Alkaloid GS high pass
Bo4g111410.1 Alkaloid GS medium pass
Bo5g114100.1 Alkaloid GS high pass
Bo5g127470.1 Alkaloid GS low borderline
Bo6g071140.1 Alkaloid GS low borderline
Bo6g116100.1 Alkaloid GS high pass
Bo7g116770.1 Alkaloid GS high pass
Bo7g119240.1 Alkaloid GS high pass
Bo8g033960.1 Alkaloid GS low borderline
Bo8g055760.1 Alkaloid GS medium pass