PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Bo6g092850.1 Alkaloid STR medium pass
Bo6g101160.1 Alkaloid STR medium pass
Bo6g114480.1 Alkaloid STR medium pass
Bo6g118300.1 Alkaloid STR medium pass
Bo7g081850.1 Alkaloid STR low borderline
Bo7g088820.1 Alkaloid STR low borderline
Bo7g111400.1 Alkaloid STR low borderline
Bo8g032000.1 Alkaloid STR low borderline
Bo8g066280.1 Alkaloid STR low borderline
Bo8g067490.1 Alkaloid STR low borderline
Bo8g081550.1 Alkaloid STR medium pass
Bo8g082890.1 Alkaloid STR medium pass
Bo8g088450.1 Alkaloid STR medium pass
Bo8g091380.1 Alkaloid STR medium pass
Bo8g091390.1 Alkaloid STR medium pass
Bo9g102360.1 Alkaloid STR low borderline
Bo9g149770.1 Alkaloid STR medium pass
Bo9g153790.1 Alkaloid STR low borderline
Bo9g166650.1 Alkaloid STR medium pass
Bo9g176070.1 Alkaloid STR low borderline
Bo01001s020.1 Alkaloid T16H medium borderline
Bo01224s050.1 Alkaloid T16H medium borderline
Bo01374s020.1 Alkaloid T16H medium borderline
Bo01514s010.1 Alkaloid T16H medium borderline
Bo05126s010.1 Alkaloid T16H medium borderline
Bo1g004790.1 Alkaloid T16H medium pass
Bo1g075770.1 Alkaloid T16H medium borderline
Bo1g087290.1 Alkaloid T16H medium borderline
Bo1g137190.1 Alkaloid T16H medium borderline
Bo2g007440.1 Alkaloid T16H medium borderline
Bo2g024710.1 Alkaloid T16H medium borderline
Bo2g080930.1 Alkaloid T16H medium borderline
Bo2g110770.1 Alkaloid T16H medium borderline
Bo2g138660.1 Alkaloid T16H medium borderline
Bo2g138960.1 Alkaloid T16H low borderline
Bo2g139040.1 Alkaloid T16H medium borderline
Bo2g139100.1 Alkaloid T16H medium borderline
Bo3g022420.1 Alkaloid T16H medium borderline
Bo3g024650.1 Alkaloid T16H medium borderline
Bo3g024670.1 Alkaloid T16H medium borderline
Bo3g024820.1 Alkaloid T16H medium borderline
Bo3g042280.1 Alkaloid T16H medium borderline
Bo3g047120.1 Alkaloid T16H medium borderline
Bo3g051010.1 Alkaloid T16H medium borderline
Bo3g057080.1 Alkaloid T16H low borderline
Bo3g074700.1 Alkaloid T16H medium borderline
Bo3g113580.1 Alkaloid T16H medium borderline
Bo3g151180.1 Alkaloid T16H low borderline
Bo4g039770.1 Alkaloid T16H medium borderline
Bo4g065810.1 Alkaloid T16H medium borderline