PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Bo3g074520.1 Steroid DWF1 medium pass
Bo3g074530.1 Steroid DWF1 medium pass
Bo5g112490.1 Steroid DWF1 medium pass
Bo5g146600.1 Steroid DWF1 low borderline
Bo6g021990.1 Steroid DWF1 medium pass
Bo6g022010.1 Steroid DWF1 medium pass
Bo00948s030.1 Steroid DWF4/CYP90B1 low borderline
Bo00948s040.1 Steroid DWF4/CYP90B1 low borderline
Bo00948s050.1 Steroid DWF4/CYP90B1 low borderline
Bo01007s020.1 Steroid DWF4/CYP90B1 low borderline
Bo01007s030.1 Steroid DWF4/CYP90B1 low borderline
Bo01224s050.1 Steroid DWF4/CYP90B1 low borderline
Bo01514s010.1 Steroid DWF4/CYP90B1 medium borderline
Bo02408s010.1 Steroid DWF4/CYP90B1 low borderline
Bo09470s010.1 Steroid DWF4/CYP90B1 low borderline
Bo14869s010.1 Steroid DWF4/CYP90B1 low borderline
Bo1g002560.1 Steroid DWF4/CYP90B1 low borderline
Bo1g002970.1 Steroid DWF4/CYP90B1 low borderline
Bo1g003680.1 Steroid DWF4/CYP90B1 medium borderline
Bo1g003710.1 Steroid DWF4/CYP90B1 low borderline
Bo1g004730.1 Steroid DWF4/CYP90B1 low borderline
Bo1g004740.1 Steroid DWF4/CYP90B1 medium borderline
Bo1g004770.1 Steroid DWF4/CYP90B1 low borderline
Bo1g004780.1 Steroid DWF4/CYP90B1 low borderline
Bo1g004840.1 Steroid DWF4/CYP90B1 low borderline
Bo1g011220.1 Steroid DWF4/CYP90B1 low borderline
Bo1g011270.1 Steroid DWF4/CYP90B1 low borderline
Bo1g057520.1 Steroid DWF4/CYP90B1 low borderline
Bo1g075770.1 Steroid DWF4/CYP90B1 low borderline
Bo1g101970.1 Steroid DWF4/CYP90B1 low borderline
Bo1g131100.1 Steroid DWF4/CYP90B1 low borderline
Bo2g006850.1 Steroid DWF4/CYP90B1 medium pass
Bo2g011840.1 Steroid DWF4/CYP90B1 medium borderline
Bo2g032590.1 Steroid DWF4/CYP90B1 low borderline
Bo2g047820.1 Steroid DWF4/CYP90B1 low borderline
Bo2g047860.1 Steroid DWF4/CYP90B1 low borderline
Bo2g055420.1 Steroid DWF4/CYP90B1 low borderline
Bo2g097650.1 Steroid DWF4/CYP90B1 low borderline
Bo2g110760.1 Steroid DWF4/CYP90B1 low borderline
Bo2g138960.1 Steroid DWF4/CYP90B1 low borderline
Bo2g139000.1 Steroid DWF4/CYP90B1 low borderline
Bo2g139010.1 Steroid DWF4/CYP90B1 low borderline
Bo2g139020.1 Steroid DWF4/CYP90B1 low borderline
Bo2g139040.1 Steroid DWF4/CYP90B1 low borderline
Bo2g139100.1 Steroid DWF4/CYP90B1 low borderline
Bo2g146400.1 Steroid DWF4/CYP90B1 low borderline
Bo2g146410.1 Steroid DWF4/CYP90B1 low borderline
Bo2g149400.1 Steroid DWF4/CYP90B1 medium borderline
Bo2g158970.1 Steroid DWF4/CYP90B1 low borderline
Bo2g158980.1 Steroid DWF4/CYP90B1 low borderline