PlantSME Plant secondary metabolism enzyme database

Brassica oleracea (brassica_oleracea)

Imported from atlas release summary for Brassica oleracea.

2915
Candidate Protein Records
2262
Pathway-Level Records
5805
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 710 22 BAHD (286) View species results
Alkaloid pathway 489 23 7DLGT (81) View species results
Phenylpropanoid pathway 475 12 POD (207) View species results
Flavonoid pathway 262 13 UFGT (166) View species results
Rosmarinic acid pathway 181 7 C4H (74) View species results
Steroid pathway 145 14 SMT1/SMT2/SMT3 (52) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2296 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 422 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Bo2g159140.1 Steroid DWF4/CYP90B1 medium borderline
Bo2g165690.1 Steroid DWF4/CYP90B1 low borderline
Bo3g002910.1 Steroid DWF4/CYP90B1 medium borderline
Bo3g003230.1 Steroid DWF4/CYP90B1 medium borderline
Bo3g019410.1 Steroid DWF4/CYP90B1 low borderline
Bo3g019420.1 Steroid DWF4/CYP90B1 low borderline
Bo3g023170.1 Steroid DWF4/CYP90B1 low borderline
Bo3g023200.1 Steroid DWF4/CYP90B1 low borderline
Bo3g037780.1 Steroid DWF4/CYP90B1 low borderline
Bo3g042280.1 Steroid DWF4/CYP90B1 low borderline
Bo3g066310.1 Steroid DWF4/CYP90B1 low borderline
Bo3g066340.1 Steroid DWF4/CYP90B1 low borderline
Bo3g066350.1 Steroid DWF4/CYP90B1 low borderline
Bo3g066360.1 Steroid DWF4/CYP90B1 low borderline
Bo3g066370.1 Steroid DWF4/CYP90B1 low borderline
Bo3g144080.1 Steroid DWF4/CYP90B1 low borderline
Bo3g152800.1 Steroid DWF4/CYP90B1 low borderline
Bo3g153450.1 Steroid DWF4/CYP90B1 low borderline
Bo3g153480.1 Steroid DWF4/CYP90B1 medium borderline
Bo3g153490.1 Steroid DWF4/CYP90B1 low borderline
Bo4g006840.1 Steroid DWF4/CYP90B1 low borderline
Bo4g024710.1 Steroid DWF4/CYP90B1 low borderline
Bo4g024800.1 Steroid DWF4/CYP90B1 low borderline
Bo4g122920.1 Steroid DWF4/CYP90B1 low borderline
Bo4g137210.1 Steroid DWF4/CYP90B1 low borderline
Bo4g137560.1 Steroid DWF4/CYP90B1 low borderline
Bo4g144150.1 Steroid DWF4/CYP90B1 medium borderline
Bo4g147100.1 Steroid DWF4/CYP90B1 low borderline
Bo4g150920.1 Steroid DWF4/CYP90B1 low borderline
Bo4g151330.1 Steroid DWF4/CYP90B1 low borderline
Bo4g154660.1 Steroid DWF4/CYP90B1 low borderline
Bo4g182650.1 Steroid DWF4/CYP90B1 low borderline
Bo4g191380.1 Steroid DWF4/CYP90B1 low borderline
Bo4g195630.1 Steroid DWF4/CYP90B1 low borderline
Bo4g195650.1 Steroid DWF4/CYP90B1 low borderline
Bo4g195660.1 Steroid DWF4/CYP90B1 medium borderline
Bo4g195670.1 Steroid DWF4/CYP90B1 medium borderline
Bo4g195680.1 Steroid DWF4/CYP90B1 medium borderline
Bo5g015310.1 Steroid DWF4/CYP90B1 low borderline
Bo5g016350.1 Steroid DWF4/CYP90B1 low borderline
Bo5g016670.1 Steroid DWF4/CYP90B1 medium borderline
Bo5g110070.1 Steroid DWF4/CYP90B1 low borderline
Bo5g128960.1 Steroid DWF4/CYP90B1 low borderline
Bo5g128980.1 Steroid DWF4/CYP90B1 low borderline
Bo5g129010.1 Steroid DWF4/CYP90B1 low borderline
Bo6g018570.1 Steroid DWF4/CYP90B1 low borderline
Bo6g072230.1 Steroid DWF4/CYP90B1 low borderline
Bo6g072240.1 Steroid DWF4/CYP90B1 low borderline
Bo6g092990.1 Steroid DWF4/CYP90B1 low borderline
Bo6g108940.1 Steroid DWF4/CYP90B1 low borderline