PlantSME Plant secondary metabolism enzyme database

Bryum knowltonii (bryum_knowltonii)

Imported from atlas release summary for Bryum knowltonii.

1560
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 376 20 NMT (105) View species results
Terpenoid pathway 372 19 BAHD (133) View species results
Phenylpropanoid pathway 355 10 POD (162) View species results
Flavonoid pathway 229 11 UFGT (86) View species results
Rosmarinic acid pathway 140 6 C4H (55) View species results
Steroid pathway 88 13 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1396 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 269 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
Bknoscaffold_110090570 Alkaloid 8HGO low borderline
Bknoscaffold_120108920 Alkaloid 8HGO medium pass
Bknoscaffold_120108930 Alkaloid 8HGO medium borderline
Bknoscaffold_130133550 Alkaloid 8HGO low borderline
Bknoscaffold_140153210 Alkaloid 8HGO medium borderline
Bknoscaffold_150184800 Alkaloid 8HGO medium borderline
Bknoscaffold_160237980 Alkaloid 8HGO medium borderline
Bknoscaffold_160240650 Alkaloid 8HGO medium borderline
Bknoscaffold_160241340 Alkaloid 8HGO medium pass
Bknoscaffold_160266670 Alkaloid 8HGO low borderline
Bknoscaffold_170319310 Alkaloid 8HGO medium borderline
Bknoscaffold_170321040 Alkaloid 8HGO medium borderline
Bknoscaffold_180346440 Alkaloid 8HGO low borderline
Bknoscaffold_180348100 Alkaloid 8HGO medium borderline
Bknoscaffold_180348150 Alkaloid 8HGO medium borderline
Bknoscaffold_190365350 Alkaloid 8HGO medium pass
Bknoscaffold_190365750 Alkaloid 8HGO medium borderline
Bknoscaffold_3150561450 Alkaloid 8HGO medium borderline
Bknoscaffold_40575770 Alkaloid 8HGO low borderline
Bknoscaffold_40578470 Alkaloid 8HGO medium borderline
Bknoscaffold_5000613140 Alkaloid 8HGO medium pass
Bknoscaffold_50594770 Alkaloid 8HGO medium borderline
Bknoscaffold_50595800 Alkaloid 8HGO medium borderline
Bknoscaffold_50598180 Alkaloid 8HGO medium borderline
Bknoscaffold_50610650 Alkaloid 8HGO low borderline
Bknoscaffold_60621850 Alkaloid 8HGO low borderline