Bryum knowltonii (bryum_knowltonii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Alkaloid pathway 24.1% Terpenoid pathway 23.85% Phenylpropanoid pathway 22.76% Flavonoid pathway 14.68% Rosmarinic acid pathway 8.97% Steroid pathway 5.64%

Family Distribution

1560 Candidate Genes

NMT 7.18% C4H 6.04% BAHD 5.5% C3'H/CYP98A 5.35% POD 4.56% CYP76 4.36% 4CL 3.97% PAL 2.9%

Other Families 60.14%

More Families (97)

UGT 99 2.52% F3'H/CYP75B 97 2.47% 7DLGT 94 2.39% UFGT 94 2.39% BR6OX2/CYP85A2 92 2.34% T3O 89 2.27% STR 87 2.22% PYKS 85 2.17% IFS 83 2.11% GS 80 2.04% DWF4/CYP90B1 80 2.04% F3H 66 1.68% IFR 64 1.63% CHS 61 1.55% SMT1/SMT2/SMT3 54 1.38% CAD 48 1.22% IO 46 1.17% TRI/TRII 45 1.15% CODM/T6ODM 43 1.1% G8O/G8H 40 1.02% F3'5'H/CYP75A 38 0.97% CYP71 38 0.97% CAS 34 0.87% H6H 32 0.82% LAC 29 0.74% HCT 29 0.74% SLS 26 0.66% 8HGO 26 0.66% CNMT 25 0.64% T16H 24 0.61% COMT 24 0.61% RAS 24 0.61% CYP90D1 23 0.59% SGD 21 0.53% FNS 20 0.51% TAT 20 0.51% CSE 19 0.48% ANR 18 0.46% CCR 17 0.43% CPD/CYP90A1 16 0.41% CYP719 15 0.38% COR 15 0.38% CYP80B1 14 0.36% CPR 14 0.36% BR6OX1/CYP85A1 14 0.36% HDS/IspG 14 0.36% NCS 13 0.33% 7DLH 13 0.33% CCoAOMT 13 0.33% BBE 12 0.31% F5H/CYP84A 11 0.28% SQS/FDFT1 11 0.28% 16OMT 10 0.25% PMT 10 0.25% SMO1/SMO2 10 0.25% AACT 10 0.25% GGPPS 10 0.25% XMT_MXMT_DXMT 9 0.23% MCT/IspD 9 0.23% ANS/LDOX 8 0.2% DFR 8 0.2% DET2 8 0.2% DWF5 8 0.2% MVK 8 0.2% TPS 8 0.2% ADC 7 0.18% CYP51G1 7 0.18% SQE 7 0.18% TYDC_DDC 6 0.15% TDC 6 0.15% CYP80F1 6 0.15% MPO 6 0.15% GES 6 0.15% ROT3/CYP90C1 6 0.15% HDR/IspH 6 0.15% DXS 6 0.15% IDI 6 0.15% LAMT 5 0.13% DXR 5 0.13% MVD 5 0.13% CHI 4 0.1% FLS 4 0.1% DWF7 4 0.1% HMGR 4 0.1% FPPS 4 0.1% 6OMT_4OMT_SOMT 3 0.08% HPPR 3 0.08% HYD1 3 0.08% CMK/IspE 3 0.08% CPI1 2 0.05% DWF1 2 0.05% FK 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% PMK 2 0.05% ISY 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Alkaloid pathway	376	20	NMT (105)	View species results
Terpenoid pathway	372	19	BAHD (133)	View species results
Phenylpropanoid pathway	355	10	POD (162)	View species results
Flavonoid pathway	229	11	UFGT (86)	View species results
Rosmarinic acid pathway	140	6	C4H (55)	View species results
Steroid pathway	88	13	CAS (31)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1396	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	269	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Bknoscaffold_100036690	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_100038420	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_100043990	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bknoscaffold_100044320	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_100044460	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_100048310	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bknoscaffold_100051970	Terpenoid	BAHD	medium	pass	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bknoscaffold_100056030	Terpenoid	BAHD	medium	pass	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bknoscaffold_100059060	Terpenoid	BAHD	low	borderline	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Bknoscaffold_100062450	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_10015750	Terpenoid	BAHD	low	borderline	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bknoscaffold_10024650	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_110063910	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_110072560	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_110079710	Terpenoid	BAHD	medium	pass	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bknoscaffold_110083570	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_110084180	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bknoscaffold_110088360	Terpenoid	BAHD	medium	pass	BAHD__00030__sp_O80816_GLC_ARATH
Bknoscaffold_110090550	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_110092960	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_120099010	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_120101980	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_120102690	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_120102750	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_120107670	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_120108320	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Bknoscaffold_120109400	Terpenoid	BAHD	low	borderline	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Bknoscaffold_120109460	Terpenoid	BAHD	medium	pass	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Bknoscaffold_120110390	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bknoscaffold_120112670	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bknoscaffold_120113240	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_120113380	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_120116080	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Bknoscaffold_120119250	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_120119270	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_120120760	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_130125770	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_130127500	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_130127580	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_130135170	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_130135220	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_130135900	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bknoscaffold_130137990	Terpenoid	BAHD	low	borderline	BAHD__00037__sp_Q3EBC2_ZDHC5_ARATH
Bknoscaffold_130138700	Terpenoid	BAHD	medium	pass	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Bknoscaffold_130139960	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bknoscaffold_130140580	Terpenoid	BAHD	low	borderline	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_130145540	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_130145580	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_130146310	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_130149810	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH