PlantSME Plant secondary metabolism enzyme database

Bryum knowltonii (bryum_knowltonii)

Imported from atlas release summary for Bryum knowltonii.

1560
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 376 20 NMT (105) View species results
Terpenoid pathway 372 19 BAHD (133) View species results
Phenylpropanoid pathway 355 10 POD (162) View species results
Flavonoid pathway 229 11 UFGT (86) View species results
Rosmarinic acid pathway 140 6 C4H (55) View species results
Steroid pathway 88 13 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1396 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 269 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
Bknoscaffold_100056150 Alkaloid H6H low borderline
Bknoscaffold_100056230 Alkaloid H6H low borderline
Bknoscaffold_100061710 Alkaloid H6H medium borderline
Bknoscaffold_110064690 Alkaloid H6H medium borderline
Bknoscaffold_110070900 Alkaloid H6H low borderline
Bknoscaffold_110071000 Alkaloid H6H low borderline
Bknoscaffold_110071030 Alkaloid H6H low borderline
Bknoscaffold_160239580 Alkaloid H6H medium borderline
Bknoscaffold_160242250 Alkaloid H6H medium pass
Bknoscaffold_160256270 Alkaloid H6H medium borderline
Bknoscaffold_170306080 Alkaloid H6H medium borderline
Bknoscaffold_170320700 Alkaloid H6H medium borderline
Bknoscaffold_190383840 Alkaloid H6H low borderline
Bknoscaffold_200440660 Alkaloid H6H medium pass
Bknoscaffold_200449210 Alkaloid H6H medium borderline
Bknoscaffold_200453900 Alkaloid H6H medium borderline
Bknoscaffold_210476940 Alkaloid H6H medium borderline
Bknoscaffold_210480730 Alkaloid H6H medium borderline
Bknoscaffold_210488220 Alkaloid H6H medium borderline
Bknoscaffold_210489770 Alkaloid H6H medium pass
Bknoscaffold_210491250 Alkaloid H6H medium borderline
Bknoscaffold_220503890 Alkaloid H6H medium pass
Bknoscaffold_230532170 Alkaloid H6H low borderline
Bknoscaffold_230534110 Alkaloid H6H low borderline
Bknoscaffold_40564810 Alkaloid H6H medium borderline
Bknoscaffold_60645430 Alkaloid H6H medium borderline
Bknoscaffold_70735330 Alkaloid H6H medium borderline
Bknoscaffold_80766420 Alkaloid H6H medium pass
Bknoscaffold_80779000 Alkaloid H6H medium borderline
Bknoscaffold_80791750 Alkaloid H6H low borderline
Bknoscaffold_90840840 Alkaloid H6H medium borderline
Bknoscaffold_90852430 Alkaloid H6H medium pass