Bryum knowltonii (bryum_knowltonii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Alkaloid pathway 24.1% Terpenoid pathway 23.85% Phenylpropanoid pathway 22.76% Flavonoid pathway 14.68% Rosmarinic acid pathway 8.97% Steroid pathway 5.64%

Family Distribution

1560 Candidate Genes

NMT 7.18% C4H 6.04% BAHD 5.5% C3'H/CYP98A 5.35% POD 4.56% CYP76 4.36% 4CL 3.97% PAL 2.9%

Other Families 60.14%

More Families (97)

UGT 99 2.52% F3'H/CYP75B 97 2.47% 7DLGT 94 2.39% UFGT 94 2.39% BR6OX2/CYP85A2 92 2.34% T3O 89 2.27% STR 87 2.22% PYKS 85 2.17% IFS 83 2.11% GS 80 2.04% DWF4/CYP90B1 80 2.04% F3H 66 1.68% IFR 64 1.63% CHS 61 1.55% SMT1/SMT2/SMT3 54 1.38% CAD 48 1.22% IO 46 1.17% TRI/TRII 45 1.15% CODM/T6ODM 43 1.1% G8O/G8H 40 1.02% F3'5'H/CYP75A 38 0.97% CYP71 38 0.97% CAS 34 0.87% H6H 32 0.82% LAC 29 0.74% HCT 29 0.74% SLS 26 0.66% 8HGO 26 0.66% CNMT 25 0.64% T16H 24 0.61% COMT 24 0.61% RAS 24 0.61% CYP90D1 23 0.59% SGD 21 0.53% FNS 20 0.51% TAT 20 0.51% CSE 19 0.48% ANR 18 0.46% CCR 17 0.43% CPD/CYP90A1 16 0.41% CYP719 15 0.38% COR 15 0.38% CYP80B1 14 0.36% CPR 14 0.36% BR6OX1/CYP85A1 14 0.36% HDS/IspG 14 0.36% NCS 13 0.33% 7DLH 13 0.33% CCoAOMT 13 0.33% BBE 12 0.31% F5H/CYP84A 11 0.28% SQS/FDFT1 11 0.28% 16OMT 10 0.25% PMT 10 0.25% SMO1/SMO2 10 0.25% AACT 10 0.25% GGPPS 10 0.25% XMT_MXMT_DXMT 9 0.23% MCT/IspD 9 0.23% ANS/LDOX 8 0.2% DFR 8 0.2% DET2 8 0.2% DWF5 8 0.2% MVK 8 0.2% TPS 8 0.2% ADC 7 0.18% CYP51G1 7 0.18% SQE 7 0.18% TYDC_DDC 6 0.15% TDC 6 0.15% CYP80F1 6 0.15% MPO 6 0.15% GES 6 0.15% ROT3/CYP90C1 6 0.15% HDR/IspH 6 0.15% DXS 6 0.15% IDI 6 0.15% LAMT 5 0.13% DXR 5 0.13% MVD 5 0.13% CHI 4 0.1% FLS 4 0.1% DWF7 4 0.1% HMGR 4 0.1% FPPS 4 0.1% 6OMT_4OMT_SOMT 3 0.08% HPPR 3 0.08% HYD1 3 0.08% CMK/IspE 3 0.08% CPI1 2 0.05% DWF1 2 0.05% FK 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% PMK 2 0.05% ISY 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Alkaloid pathway	376	20	NMT (105)	View species results
Terpenoid pathway	372	19	BAHD (133)	View species results
Phenylpropanoid pathway	355	10	POD (162)	View species results
Flavonoid pathway	229	11	UFGT (86)	View species results
Rosmarinic acid pathway	140	6	C4H (55)	View species results
Steroid pathway	88	13	CAS (31)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1396	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	269	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Bknoscaffold_140150830	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_140151360	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Bknoscaffold_150180800	Terpenoid	BAHD	low	borderline	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_150186760	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Bknoscaffold_150186770	Terpenoid	BAHD	medium	pass	BAHD__00040__sp_Q41745_LPAT_MAIZE
Bknoscaffold_150187350	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_150196750	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_150197090	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_150201060	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bknoscaffold_150202870	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
Bknoscaffold_150203590	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_150208110	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Bknoscaffold_160214880	Terpenoid	BAHD	low	borderline	BAHD__00042__sp_Q500Z2_ZDH20_ARATH
Bknoscaffold_160217280	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_160218210	Terpenoid	BAHD	medium	pass	BAHD__00014__sp_B9RK42_GPC1_RICCO
Bknoscaffold_160220410	Terpenoid	BAHD	low	borderline	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bknoscaffold_160223560	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_160229600	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_160238720	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_160254720	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bknoscaffold_160262360	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_160267210	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_160270080	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_160270090	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_160270120	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_160273650	Terpenoid	BAHD	medium	pass	BAHD__00093__sp_Q9SV07_ASAT1_ARATH
Bknoscaffold_160274540	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bknoscaffold_160275660	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_160275720	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_160276310	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_160277690	Terpenoid	BAHD	low	borderline	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Bknoscaffold_170290550	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Bknoscaffold_170291800	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_170292230	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_170292300	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_170293200	Terpenoid	BAHD	medium	pass	BAHD__00063__sp_Q93VV0_ZDHC6_ARATH
Bknoscaffold_170294020	Terpenoid	BAHD	medium	pass	BAHD__00096__sp_Q9XGY6_WAXS1_SIMCH
Bknoscaffold_170296310	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_170296330	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_170298690	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_170302200	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_170307390	Terpenoid	BAHD	medium	pass	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bknoscaffold_170319830	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_180331720	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bknoscaffold_180346960	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_180349290	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Bknoscaffold_180349760	Terpenoid	BAHD	low	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bknoscaffold_180352710	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_190357750	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_190363030	Terpenoid	BAHD	medium	pass	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE