Bryum knowltonii (bryum_knowltonii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Alkaloid pathway 24.1% Terpenoid pathway 23.85% Phenylpropanoid pathway 22.76% Flavonoid pathway 14.68% Rosmarinic acid pathway 8.97% Steroid pathway 5.64%

Family Distribution

1560 Family-Level Assignments

NMT 7.18% C4H 6.04% BAHD 5.5% C3'H/CYP98A 5.35% POD 4.56% CYP76 4.36% 4CL 3.97% PAL 2.9%

Other Families 60.14%

More Families (97)

UGT 99 2.52% F3'H/CYP75B 97 2.47% 7DLGT 94 2.39% UFGT 94 2.39% BR6OX2/CYP85A2 92 2.34% T3O 89 2.27% STR 87 2.22% PYKS 85 2.17% IFS 83 2.11% GS 80 2.04% DWF4/CYP90B1 80 2.04% F3H 66 1.68% IFR 64 1.63% CHS 61 1.55% SMT1/SMT2/SMT3 54 1.38% CAD 48 1.22% IO 46 1.17% TRI/TRII 45 1.15% CODM/T6ODM 43 1.1% G8O/G8H 40 1.02% F3'5'H/CYP75A 38 0.97% CYP71 38 0.97% CAS 34 0.87% H6H 32 0.82% LAC 29 0.74% HCT 29 0.74% SLS 26 0.66% 8HGO 26 0.66% CNMT 25 0.64% T16H 24 0.61% COMT 24 0.61% RAS 24 0.61% CYP90D1 23 0.59% SGD 21 0.53% FNS 20 0.51% TAT 20 0.51% CSE 19 0.48% ANR 18 0.46% CCR 17 0.43% CPD/CYP90A1 16 0.41% CYP719 15 0.38% COR 15 0.38% CYP80B1 14 0.36% CPR 14 0.36% BR6OX1/CYP85A1 14 0.36% HDS/IspG 14 0.36% NCS 13 0.33% 7DLH 13 0.33% CCoAOMT 13 0.33% BBE 12 0.31% F5H/CYP84A 11 0.28% SQS/FDFT1 11 0.28% 16OMT 10 0.25% PMT 10 0.25% SMO1/SMO2 10 0.25% AACT 10 0.25% GGPPS 10 0.25% XMT_MXMT_DXMT 9 0.23% MCT/IspD 9 0.23% ANS/LDOX 8 0.2% DFR 8 0.2% DET2 8 0.2% DWF5 8 0.2% MVK 8 0.2% TPS 8 0.2% ADC 7 0.18% CYP51G1 7 0.18% SQE 7 0.18% TYDC_DDC 6 0.15% TDC 6 0.15% CYP80F1 6 0.15% MPO 6 0.15% GES 6 0.15% ROT3/CYP90C1 6 0.15% HDR/IspH 6 0.15% DXS 6 0.15% IDI 6 0.15% LAMT 5 0.13% DXR 5 0.13% MVD 5 0.13% CHI 4 0.1% FLS 4 0.1% DWF7 4 0.1% HMGR 4 0.1% FPPS 4 0.1% 6OMT_4OMT_SOMT 3 0.08% HPPR 3 0.08% HYD1 3 0.08% CMK/IspE 3 0.08% CPI1 2 0.05% DWF1 2 0.05% FK 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% PMK 2 0.05% ISY 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Family-Level Assignments	Families	Top family	Results
Alkaloid pathway	376	20	NMT (105)	View species results
Terpenoid pathway	372	19	BAHD (133)	View species results
Phenylpropanoid pathway	355	10	POD (162)	View species results
Flavonoid pathway	229	11	UFGT (86)	View species results
Rosmarinic acid pathway	140	6	C4H (55)	View species results
Steroid pathway	88	13	CAS (31)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Family-level assignments	Included families
P450/oxygenase	24	1396	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	269	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Bknoscaffold_190366380	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_190367050	Terpenoid	BAHD	medium	pass	BAHD__00068__sp_Q9C533_ZDHC1_ARATH
Bknoscaffold_190376370	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bknoscaffold_190377380	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bknoscaffold_190378250	Terpenoid	BAHD	low	borderline	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Bknoscaffold_190379620	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bknoscaffold_200437020	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bknoscaffold_200444960	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_200445570	Terpenoid	BAHD	low	borderline	BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
Bknoscaffold_200445590	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bknoscaffold_200445710	Terpenoid	BAHD	low	borderline	BAHD__00020__sp_K4D9Y4_ASAT3_SOLLC
Bknoscaffold_200448380	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_200448390	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_200451520	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Bknoscaffold_20436350	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bknoscaffold_20436370	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bknoscaffold_20436390	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bknoscaffold_210478560	Terpenoid	BAHD	medium	pass	BAHD__00056__sp_Q8L5Y5_ZDH17_ARATH
Bknoscaffold_210481550	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_210481600	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_210484430	Terpenoid	BAHD	low	borderline	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Bknoscaffold_210484540	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bknoscaffold_210484600	Terpenoid	BAHD	medium	pass	BAHD__00002__sp_A0A068BIF1_AT9_ACTER
Bknoscaffold_210485260	Terpenoid	BAHD	medium	pass	BAHD__00080__sp_Q9LIH7_ZDHC7_ARATH
Bknoscaffold_210493740	Terpenoid	BAHD	medium	pass	BAHD__00041__sp_Q4VCM1_LCAT2_ARATH
Bknoscaffold_220496520	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_220496610	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_220499010	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bknoscaffold_220504090	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Bknoscaffold_220514850	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bknoscaffold_230529820	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bknoscaffold_230541210	Terpenoid	BAHD	medium	pass	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Bknoscaffold_230546910	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bknoscaffold_230550210	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_30554400	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bknoscaffold_30554420	Terpenoid	BAHD	medium	pass	BAHD__00035__sp_Q0WQK2_ZDHC9_ARATH
Bknoscaffold_40564540	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_40578890	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bknoscaffold_40579860	Terpenoid	BAHD	low	borderline	BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Bknoscaffold_50593230	Terpenoid	BAHD	low	borderline	BAHD__00018__sp_I1MRZ6_DAT32_SOYBN
Bknoscaffold_50594470	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bknoscaffold_50610910	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_60623940	Terpenoid	BAHD	low	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bknoscaffold_60624520	Terpenoid	BAHD	low	borderline	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bknoscaffold_60629380	Terpenoid	BAHD	low	borderline	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bknoscaffold_60630040	Terpenoid	BAHD	low	borderline	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bknoscaffold_60638470	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_60641260	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_60645530	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_60651730	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO