Bryum knowltonii (bryum_knowltonii)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Alkaloid pathway 24.1% Terpenoid pathway 23.85% Phenylpropanoid pathway 22.76% Flavonoid pathway 14.68% Rosmarinic acid pathway 8.97% Steroid pathway 5.64%

Family Distribution

1560 Candidate Genes

NMT 7.18% C4H 6.04% BAHD 5.5% C3'H/CYP98A 5.35% POD 4.56% CYP76 4.36% 4CL 3.97% PAL 2.9%

Other Families 60.14%

More Families (97)

UGT 99 2.52% F3'H/CYP75B 97 2.47% 7DLGT 94 2.39% UFGT 94 2.39% BR6OX2/CYP85A2 92 2.34% T3O 89 2.27% STR 87 2.22% PYKS 85 2.17% IFS 83 2.11% GS 80 2.04% DWF4/CYP90B1 80 2.04% F3H 66 1.68% IFR 64 1.63% CHS 61 1.55% SMT1/SMT2/SMT3 54 1.38% CAD 48 1.22% IO 46 1.17% TRI/TRII 45 1.15% CODM/T6ODM 43 1.1% G8O/G8H 40 1.02% F3'5'H/CYP75A 38 0.97% CYP71 38 0.97% CAS 34 0.87% H6H 32 0.82% LAC 29 0.74% HCT 29 0.74% SLS 26 0.66% 8HGO 26 0.66% CNMT 25 0.64% T16H 24 0.61% COMT 24 0.61% RAS 24 0.61% CYP90D1 23 0.59% SGD 21 0.53% FNS 20 0.51% TAT 20 0.51% CSE 19 0.48% ANR 18 0.46% CCR 17 0.43% CPD/CYP90A1 16 0.41% CYP719 15 0.38% COR 15 0.38% CYP80B1 14 0.36% CPR 14 0.36% BR6OX1/CYP85A1 14 0.36% HDS/IspG 14 0.36% NCS 13 0.33% 7DLH 13 0.33% CCoAOMT 13 0.33% BBE 12 0.31% F5H/CYP84A 11 0.28% SQS/FDFT1 11 0.28% 16OMT 10 0.25% PMT 10 0.25% SMO1/SMO2 10 0.25% AACT 10 0.25% GGPPS 10 0.25% XMT_MXMT_DXMT 9 0.23% MCT/IspD 9 0.23% ANS/LDOX 8 0.2% DFR 8 0.2% DET2 8 0.2% DWF5 8 0.2% MVK 8 0.2% TPS 8 0.2% ADC 7 0.18% CYP51G1 7 0.18% SQE 7 0.18% TYDC_DDC 6 0.15% TDC 6 0.15% CYP80F1 6 0.15% MPO 6 0.15% GES 6 0.15% ROT3/CYP90C1 6 0.15% HDR/IspH 6 0.15% DXS 6 0.15% IDI 6 0.15% LAMT 5 0.13% DXR 5 0.13% MVD 5 0.13% CHI 4 0.1% FLS 4 0.1% DWF7 4 0.1% HMGR 4 0.1% FPPS 4 0.1% 6OMT_4OMT_SOMT 3 0.08% HPPR 3 0.08% HYD1 3 0.08% CMK/IspE 3 0.08% CPI1 2 0.05% DWF1 2 0.05% FK 2 0.05% MDS/IspF 2 0.05% HMGS 2 0.05% PMK 2 0.05% ISY 1 0.03% GPPS 1 0.03%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Alkaloid pathway	376	20	NMT (105)	View species results
Terpenoid pathway	372	19	BAHD (133)	View species results
Phenylpropanoid pathway	355	10	POD (162)	View species results
Flavonoid pathway	229	11	UFGT (86)	View species results
Rosmarinic acid pathway	140	6	C4H (55)	View species results
Steroid pathway	88	13	CAS (31)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	1396	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	269	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: BAHD

Gene	Pathway	Family	Confidence	Status	Best Target
Bknoscaffold_60656940	Terpenoid	BAHD	medium	pass	BAHD__00004__sp_A0A0M4FCN7_RAM2_PETHY
Bknoscaffold_60660580	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_60660840	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_60661340	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_60668870	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Bknoscaffold_60678310	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_60678470	Terpenoid	BAHD	low	borderline	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_60679990	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_60689190	Terpenoid	BAHD	low	borderline	BAHD__00021__sp_K7K424_DAT2D_SOYBN
Bknoscaffold_6820693920	Terpenoid	BAHD	low	borderline	BAHD__00044__sp_Q56WD9_THIK2_ARATH
Bknoscaffold_70698690	Terpenoid	BAHD	medium	pass	BAHD__00074__sp_Q9FFQ7_FACT_ARATH
Bknoscaffold_70703790	Terpenoid	BAHD	medium	pass	BAHD__00088__sp_Q9M7Z1_ODB2_ARATH
Bknoscaffold_70705290	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_70705370	Terpenoid	BAHD	low	borderline	BAHD__00026__sp_O64811_SCP9_ARATH
Bknoscaffold_70714390	Terpenoid	BAHD	medium	pass	BAHD__00057__sp_Q8L7R3_LPCT1_ARATH
Bknoscaffold_70721460	Terpenoid	BAHD	medium	pass	BAHD__00062__sp_Q93V61_LCAT3_ARATH
Bknoscaffold_70728790	Terpenoid	BAHD	medium	pass	BAHD__00034__sp_P10349_GPAT2_CUCMO
Bknoscaffold_70735250	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_70739860	Terpenoid	BAHD	medium	pass	BAHD__00023__sp_O22975_LPAAT_ARATH
Bknoscaffold_70741480	Terpenoid	BAHD	medium	pass	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_70742280	Terpenoid	BAHD	medium	pass	BAHD__00036__sp_Q10L01_ZDHC9_ORYSJ
Bknoscaffold_70749030	Terpenoid	BAHD	low	borderline	BAHD__00067__sp_Q9ASU1_DGAT2_ARATH
Bknoscaffold_70753180	Terpenoid	BAHD	low	borderline	BAHD__00043__sp_Q52T38_ZDH22_ARATH
Bknoscaffold_80764730	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_80768800	Terpenoid	BAHD	medium	pass	BAHD__00022__sp_K7PEY4_RAM2_MEDTR
Bknoscaffold_80770370	Terpenoid	BAHD	medium	pass	BAHD__00047__sp_Q5KS41_WSD11_ARATH
Bknoscaffold_80776720	Terpenoid	BAHD	medium	pass	BAHD__00017__sp_F4IDU4_MBOA1_ARATH
Bknoscaffold_80776740	Terpenoid	BAHD	low	borderline	BAHD__00006__sp_A0A2R6Q326_AT16_ACTCC
Bknoscaffold_80782450	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_80782560	Terpenoid	BAHD	medium	pass	BAHD__00092__sp_Q9SU91_LPXA_ARATH
Bknoscaffold_80784900	Terpenoid	BAHD	medium	pass	BAHD__00016__sp_D4NUX0_HCT1_ACTRA
Bknoscaffold_80789270	Terpenoid	BAHD	medium	pass	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bknoscaffold_80790120	Terpenoid	BAHD	medium	pass	BAHD__00051__sp_Q7XA86_ZDH11_ARATH
Bknoscaffold_80791740	Terpenoid	BAHD	low	borderline	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bknoscaffold_80795960	Terpenoid	BAHD	medium	pass	BAHD__00059__sp_Q8S8S2_LPCT2_ARATH
Bknoscaffold_80796130	Terpenoid	BAHD	low	borderline	BAHD__00005__sp_A0A161IUT7_DGAT1_CORAE
Bknoscaffold_80797140	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH
Bknoscaffold_80800260	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_80800750	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bknoscaffold_80800930	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bknoscaffold_80802360	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bknoscaffold_80803090	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bknoscaffold_80805210	Terpenoid	BAHD	low	borderline	BAHD__00058__sp_Q8LG50_LPAT2_ARATH
Bknoscaffold_80808450	Terpenoid	BAHD	medium	pass	BAHD__00060__sp_Q8VYP5_ZDH14_ARATH
Bknoscaffold_90817000	Terpenoid	BAHD	medium	pass	BAHD__00052__sp_Q8GWG0_GPAT9_ARATH
Bknoscaffold_90818660	Terpenoid	BAHD	low	borderline	BAHD__00039__sp_Q3ZPN4_ACMAT_VITLA
Bknoscaffold_90819840	Terpenoid	BAHD	medium	pass	BAHD__00082__sp_Q9LLY4_LPAT1_BRANA
Bknoscaffold_90819980	Terpenoid	BAHD	medium	pass	BAHD__00077__sp_Q9FNA9_PDAT1_ARATH
Bknoscaffold_90820620	Terpenoid	BAHD	low	borderline	BAHD__00025__sp_O64810_SCP10_ARATH
Bknoscaffold_90823820	Terpenoid	BAHD	low	borderline	BAHD__00055__sp_Q8H780_SCP13_ARATH