PlantSME Plant secondary metabolism enzyme database

Bryum knowltonii (bryum_knowltonii)

Imported from atlas release summary for Bryum knowltonii.

1560
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Alkaloid pathway 376 20 NMT (105) View species results
Terpenoid pathway 372 19 BAHD (133) View species results
Phenylpropanoid pathway 355 10 POD (162) View species results
Flavonoid pathway 229 11 UFGT (86) View species results
Rosmarinic acid pathway 140 6 C4H (55) View species results
Steroid pathway 88 13 CAS (31) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1396 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 269 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
Bknoscaffold_160222810 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_160223080 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_180353670 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_190356840 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_200454650 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454730 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454750 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454760 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454780 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_200454900 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454940 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454960 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454980 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200455000 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475610 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475630 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475690 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475700 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475760 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210475880 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210476100 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210476120 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210476140 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_210476210 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_210476250 Phenylpropanoid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_40571480 Phenylpropanoid PAL low borderline PAL__00005__sp_Q50EX7_PAL1_PETHY
Bknoscaffold_100041500 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Bknoscaffold_110067330 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Bknoscaffold_110086830 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bknoscaffold_140152520 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_140152540 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_150185680 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_150185710 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_150197270 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_150198480 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_160222600 Rosmarinic Acid PAL medium pass PAL__00005__sp_Q50EX7_PAL1_PETHY
Bknoscaffold_160222610 Rosmarinic Acid PAL medium pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_160222620 Rosmarinic Acid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
Bknoscaffold_160222810 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_160223080 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_180353670 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_190356840 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_200454650 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454730 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454750 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454760 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454780 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
Bknoscaffold_200454900 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454940 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH
Bknoscaffold_200454960 Rosmarinic Acid PAL high pass PAL__00009__sp_Q9SS45_PAL4_ARATH