Bryum knowltonii (bryum_knowltonii)
Imported from atlas release summary for Bryum knowltonii.
1560
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1560
Candidate Genes
NMT
7.18%
C4H
6.04%
BAHD
5.5%
C3'H/CYP98A
5.35%
POD
4.56%
CYP76
4.36%
4CL
3.97%
PAL
2.9%
Other Families
60.14%
More Families (97)
UGT
99
2.52%
F3'H/CYP75B
97
2.47%
7DLGT
94
2.39%
UFGT
94
2.39%
BR6OX2/CYP85A2
92
2.34%
T3O
89
2.27%
STR
87
2.22%
PYKS
85
2.17%
IFS
83
2.11%
GS
80
2.04%
DWF4/CYP90B1
80
2.04%
F3H
66
1.68%
IFR
64
1.63%
CHS
61
1.55%
SMT1/SMT2/SMT3
54
1.38%
CAD
48
1.22%
IO
46
1.17%
TRI/TRII
45
1.15%
CODM/T6ODM
43
1.1%
G8O/G8H
40
1.02%
F3'5'H/CYP75A
38
0.97%
CYP71
38
0.97%
CAS
34
0.87%
H6H
32
0.82%
LAC
29
0.74%
HCT
29
0.74%
SLS
26
0.66%
8HGO
26
0.66%
CNMT
25
0.64%
T16H
24
0.61%
COMT
24
0.61%
RAS
24
0.61%
CYP90D1
23
0.59%
SGD
21
0.53%
FNS
20
0.51%
TAT
20
0.51%
CSE
19
0.48%
ANR
18
0.46%
CCR
17
0.43%
CPD/CYP90A1
16
0.41%
CYP719
15
0.38%
COR
15
0.38%
CYP80B1
14
0.36%
CPR
14
0.36%
BR6OX1/CYP85A1
14
0.36%
HDS/IspG
14
0.36%
NCS
13
0.33%
7DLH
13
0.33%
CCoAOMT
13
0.33%
BBE
12
0.31%
F5H/CYP84A
11
0.28%
SQS/FDFT1
11
0.28%
16OMT
10
0.25%
PMT
10
0.25%
SMO1/SMO2
10
0.25%
AACT
10
0.25%
GGPPS
10
0.25%
XMT_MXMT_DXMT
9
0.23%
MCT/IspD
9
0.23%
ANS/LDOX
8
0.2%
DFR
8
0.2%
DET2
8
0.2%
DWF5
8
0.2%
MVK
8
0.2%
TPS
8
0.2%
ADC
7
0.18%
CYP51G1
7
0.18%
SQE
7
0.18%
TYDC_DDC
6
0.15%
TDC
6
0.15%
CYP80F1
6
0.15%
MPO
6
0.15%
GES
6
0.15%
ROT3/CYP90C1
6
0.15%
HDR/IspH
6
0.15%
DXS
6
0.15%
IDI
6
0.15%
LAMT
5
0.13%
DXR
5
0.13%
MVD
5
0.13%
CHI
4
0.1%
FLS
4
0.1%
DWF7
4
0.1%
HMGR
4
0.1%
FPPS
4
0.1%
6OMT_4OMT_SOMT
3
0.08%
HPPR
3
0.08%
HYD1
3
0.08%
CMK/IspE
3
0.08%
CPI1
2
0.05%
DWF1
2
0.05%
FK
2
0.05%
MDS/IspF
2
0.05%
HMGS
2
0.05%
PMK
2
0.05%
ISY
1
0.03%
GPPS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 376 | 20 | NMT (105) | View species results |
| Terpenoid pathway | 372 | 19 | BAHD (133) | View species results |
| Phenylpropanoid pathway | 355 | 10 | POD (162) | View species results |
| Flavonoid pathway | 229 | 11 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 140 | 6 | C4H (55) | View species results |
| Steroid pathway | 88 | 13 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1396 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 269 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bknoscaffold_190361540 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_190361550 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_190361970 | Phenylpropanoid | POD | low | borderline | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| Bknoscaffold_200440840 | Phenylpropanoid | POD | medium | pass | POD__00017__sp_Q75SY5_PRXQ_GENTR |
| Bknoscaffold_200462440 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_20390280 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_20395730 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_20419280 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_210466680 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_210474960 | Phenylpropanoid | POD | medium | pass | POD__00003__sp_A9PCL4_PRX2_POPTR |
| Bknoscaffold_210489490 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Bknoscaffold_210489900 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Bknoscaffold_210493760 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_220502130 | Phenylpropanoid | POD | low | borderline | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_220503400 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Bknoscaffold_220504480 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_220504810 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_220504820 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_220504850 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Bknoscaffold_220518400 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Bknoscaffold_220518950 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_230524900 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_230525790 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Bknoscaffold_230540100 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Bknoscaffold_230540140 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| Bknoscaffold_230540550 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_230541800 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Bknoscaffold_230551920 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_40563590 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |
| Bknoscaffold_40567900 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_40571860 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_40573080 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_40573090 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Bknoscaffold_40573100 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_40573120 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_40574270 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_40575600 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_40580660 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_40581900 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_5050613170 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_50590600 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_50592450 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_50592460 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_50594840 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_50598030 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_50600920 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_50600930 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_50602590 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_50606940 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_50611460 | Phenylpropanoid | POD | medium | pass | POD__00007__sp_P0C5C9_REHYA_ORYSJ |