Bryum knowltonii (bryum_knowltonii)
Imported from atlas release summary for Bryum knowltonii.
2163
Candidate Protein Records
1560
Pathway-Level Records
3926
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
3926
Family-Level Calls
NMT
7.18%
C4H
6.04%
BAHD
5.5%
C3'H/CYP98A
5.35%
POD
4.56%
CYP76
4.36%
4CL
3.97%
PAL
2.9%
Other Families
60.14%
More Families (97)
UGT
99
2.52%
F3'H/CYP75B
97
2.47%
7DLGT
94
2.39%
UFGT
94
2.39%
BR6OX2/CYP85A2
92
2.34%
T3O
89
2.27%
STR
87
2.22%
PYKS
85
2.17%
IFS
83
2.11%
GS
80
2.04%
DWF4/CYP90B1
80
2.04%
F3H
66
1.68%
IFR
64
1.63%
CHS
61
1.55%
SMT1/SMT2/SMT3
54
1.38%
CAD
48
1.22%
IO
46
1.17%
TRI/TRII
45
1.15%
CODM/T6ODM
43
1.1%
G8O/G8H
40
1.02%
F3'5'H/CYP75A
38
0.97%
CYP71
38
0.97%
CAS
34
0.87%
H6H
32
0.82%
LAC
29
0.74%
HCT
29
0.74%
SLS
26
0.66%
8HGO
26
0.66%
CNMT
25
0.64%
T16H
24
0.61%
COMT
24
0.61%
RAS
24
0.61%
CYP90D1
23
0.59%
SGD
21
0.53%
FNS
20
0.51%
TAT
20
0.51%
CSE
19
0.48%
ANR
18
0.46%
CCR
17
0.43%
CPD/CYP90A1
16
0.41%
CYP719
15
0.38%
COR
15
0.38%
CYP80B1
14
0.36%
CPR
14
0.36%
BR6OX1/CYP85A1
14
0.36%
HDS/IspG
14
0.36%
NCS
13
0.33%
7DLH
13
0.33%
CCoAOMT
13
0.33%
BBE
12
0.31%
F5H/CYP84A
11
0.28%
SQS/FDFT1
11
0.28%
16OMT
10
0.25%
PMT
10
0.25%
SMO1/SMO2
10
0.25%
AACT
10
0.25%
GGPPS
10
0.25%
XMT_MXMT_DXMT
9
0.23%
MCT/IspD
9
0.23%
ANS/LDOX
8
0.2%
DFR
8
0.2%
DET2
8
0.2%
DWF5
8
0.2%
MVK
8
0.2%
TPS
8
0.2%
ADC
7
0.18%
CYP51G1
7
0.18%
SQE
7
0.18%
TYDC_DDC
6
0.15%
TDC
6
0.15%
CYP80F1
6
0.15%
MPO
6
0.15%
GES
6
0.15%
ROT3/CYP90C1
6
0.15%
HDR/IspH
6
0.15%
DXS
6
0.15%
IDI
6
0.15%
LAMT
5
0.13%
DXR
5
0.13%
MVD
5
0.13%
CHI
4
0.1%
FLS
4
0.1%
DWF7
4
0.1%
HMGR
4
0.1%
FPPS
4
0.1%
6OMT_4OMT_SOMT
3
0.08%
HPPR
3
0.08%
HYD1
3
0.08%
CMK/IspE
3
0.08%
CPI1
2
0.05%
DWF1
2
0.05%
FK
2
0.05%
MDS/IspF
2
0.05%
HMGS
2
0.05%
PMK
2
0.05%
ISY
1
0.03%
GPPS
1
0.03%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Alkaloid pathway | 376 | 20 | NMT (105) | View species results |
| Terpenoid pathway | 372 | 19 | BAHD (133) | View species results |
| Phenylpropanoid pathway | 355 | 10 | POD (162) | View species results |
| Flavonoid pathway | 229 | 11 | UFGT (86) | View species results |
| Rosmarinic acid pathway | 140 | 6 | C4H (55) | View species results |
| Steroid pathway | 88 | 13 | CAS (31) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1396 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 269 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Bknoscaffold_110086990 | Phenylpropanoid | POD | medium | pass | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Bknoscaffold_110087970 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_110089640 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_110089660 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_110089750 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_110090100 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_110090210 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_110095700 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_110095710 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_110096810 | Phenylpropanoid | POD | low | borderline | POD__00006__sp_O22850_GPX3_ARATH |
| Bknoscaffold_120099760 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Bknoscaffold_120106070 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_120110010 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_120110840 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_120112620 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_120112760 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_120112790 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_130135740 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_130135790 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_130135940 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_130137540 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_130138150 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_130142450 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| Bknoscaffold_130149200 | Phenylpropanoid | POD | medium | pass | POD__00016__sp_Q6QPJ6_PRXQ_POPJC |
| Bknoscaffold_140150920 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_140152880 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Bknoscaffold_140156000 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Bknoscaffold_150176560 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_150176570 | Phenylpropanoid | POD | low | borderline | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| Bknoscaffold_150182910 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| Bknoscaffold_150185450 | Phenylpropanoid | POD | medium | pass | POD__00011__sp_Q05431_APX1_ARATH |
| Bknoscaffold_150187160 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_150196060 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_150207300 | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_150209920 | Phenylpropanoid | POD | low | borderline | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Bknoscaffold_150210630 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_160212500 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_160213230 | Phenylpropanoid | POD | low | borderline | POD__00026__sp_Q9XEX2_PRX2B_ARATH |
| Bknoscaffold_160224010 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| Bknoscaffold_160239180 | Phenylpropanoid | POD | low | borderline | POD__00006__sp_O22850_GPX3_ARATH |
| Bknoscaffold_160242220 | Phenylpropanoid | POD | medium | pass | POD__00008__sp_P52574_REHY_SYNRU |
| Bknoscaffold_160247840 | Phenylpropanoid | POD | medium | pass | POD__00013__sp_Q4W1I8_PER1_ZINEL |
| Bknoscaffold_160254330 | Phenylpropanoid | POD | low | borderline | POD__00018__sp_Q8H0V5_OCP3_ARATH |
| Bknoscaffold_160257880 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| Bknoscaffold_160261450 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_160261670 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_160274360 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_160275730 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| Bknoscaffold_160278370 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| Bknoscaffold_160278380 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |