Cicer reticulatum (cicer_reticulatum)
/
Imported from atlas release summary for Cicer reticulatum.
1432
Candidate Protein Records
1197
Pathway-Level Records
2835
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
- Download candidate protein FASTA for this species
Pathway Coverage
6
Pathways
Family Distribution
2835
Family-Level Calls
C3'H/CYP98A
5.5%
BAHD
5.47%
C4H
5.15%
4CL
4.97%
UGT
4.73%
UFGT
4.37%
7DLGT
4.34%
POD
4.06%
Other Families
61.41%
More Families (96)
IFS
98
3.46%
CYP76
94
3.32%
T3O
85
3.0%
F3H
85
3.0%
NMT
72
2.54%
DWF4/CYP90B1
62
2.19%
STR
54
1.9%
CODM/T6ODM
52
1.83%
F3'H/CYP75B
46
1.62%
H6H
45
1.59%
BR6OX2/CYP85A2
45
1.59%
SMT1/SMT2/SMT3
41
1.45%
CYP71
36
1.27%
SGD
35
1.23%
CSE
33
1.16%
PYKS
32
1.13%
TRI/TRII
31
1.09%
CAD
31
1.09%
LAC
30
1.06%
COMT
27
0.95%
RAS
27
0.95%
IFR
26
0.92%
GS
24
0.85%
IO
24
0.85%
CAS
24
0.85%
HCT
23
0.81%
PMT
20
0.71%
7DLH
19
0.67%
COR
19
0.67%
ANR
19
0.67%
CCR
19
0.67%
16OMT
18
0.63%
TPS
18
0.63%
T16H
17
0.6%
BBE
17
0.6%
GES
17
0.6%
BR6OX1/CYP85A1
17
0.6%
CYP90D1
17
0.6%
FNS
16
0.56%
SLS
15
0.53%
PAL
15
0.53%
CYP51G1
15
0.53%
F3'5'H/CYP75A
14
0.49%
NCS
13
0.46%
ROT3/CYP90C1
13
0.46%
G8O/G8H
12
0.42%
CNMT
11
0.39%
TAT
11
0.39%
CPD/CYP90A1
11
0.39%
8HGO
10
0.35%
ANS/LDOX
10
0.35%
CHS
10
0.35%
DFR
9
0.32%
MVD
9
0.32%
MPO
8
0.28%
DET2
8
0.28%
GGPPS
8
0.28%
DXS
8
0.28%
AACT
8
0.28%
CHI
7
0.25%
F5H/CYP84A
7
0.25%
CCoAOMT
7
0.25%
CPR
7
0.25%
SQS/FDFT1
7
0.25%
LAMT
6
0.21%
HPPR
6
0.21%
ISY
5
0.18%
CYP719
4
0.14%
SQE
4
0.14%
SMO1/SMO2
4
0.14%
TDC
3
0.11%
FLS
3
0.11%
HMGR
3
0.11%
MVK
3
0.11%
MCT/IspD
3
0.11%
CYP80B1
2
0.07%
ODC
2
0.07%
TYDC_DDC
2
0.07%
DWF1
2
0.07%
FPPS
2
0.07%
DXR
2
0.07%
HDR/IspH
2
0.07%
HMGS
2
0.07%
CYP80F1
1
0.04%
XMT_MXMT_DXMT
1
0.04%
ADC
1
0.04%
FK
1
0.04%
CPI1
1
0.04%
DWF7
1
0.04%
DWF5
1
0.04%
HYD1
1
0.04%
IDI
1
0.04%
HDS/IspG
1
0.04%
PMK
1
0.04%
CMK/IspE
1
0.04%
MDS/IspF
1
0.04%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Pathway-Level Records | Detected Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 325 | 19 | UGT (131) | View species results |
| Alkaloid pathway | 269 | 20 | 7DLGT (56) | View species results |
| Phenylpropanoid pathway | 255 | 11 | POD (106) | View species results |
| Flavonoid pathway | 178 | 9 | UFGT (114) | View species results |
| Rosmarinic acid pathway | 106 | 7 | C4H (42) | View species results |
| Steroid pathway | 64 | 13 | SMT1/SMT2/SMT3 (23) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Detected families | Assignment calls | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 956 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 205 | BAHD, HCT, RAS |
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
| Protein/Isoform Record | Pathway | Family | Confidence | Status |
|---|---|---|---|---|
| Cr_11395.1|Cr_LG_5:2485749-2488119|plus| | Alkaloid | H6H | medium | borderline |
| Cr_11763.1|Cr_LG_5:7439734-7442074|minus| | Alkaloid | H6H | medium | borderline |
| Cr_13973.1|Cr_LG_5:41610648-41612408|minus| | Alkaloid | H6H | medium | borderline |
| Cr_15210.1|Cr_LG_6:13260633-13265930|plus| | Alkaloid | H6H | low | borderline |
| Cr_15624.1|Cr_LG_6:18809933-18810839|plus| | Alkaloid | H6H | low | borderline |
| Cr_16030.1|Cr_LG_6:23490512-23492508|minus| | Alkaloid | H6H | low | borderline |
| Cr_16069.1|Cr_LG_6:23871121-23873102|plus| | Alkaloid | H6H | low | borderline |
| Cr_16839.1|Cr_LG_6:35924808-35926810|plus| | Alkaloid | H6H | low | borderline |
| Cr_16840.1|Cr_LG_6:35933432-35935945|plus| | Alkaloid | H6H | low | borderline |
| Cr_18218.1|Cr_LG_7:4215091-4218397|minus| | Alkaloid | H6H | low | borderline |
| Cr_18363.1|Cr_LG_7:6007564-6010216|plus| | Alkaloid | H6H | medium | borderline |
| Cr_18544.1|Cr_LG_7:8817159-8819956|minus| | Alkaloid | H6H | high | pass |
| Cr_18545.1|Cr_LG_7:8844416-8847599|minus| | Alkaloid | H6H | high | pass |
| Cr_18552.1|Cr_LG_7:8910725-8914650|minus| | Alkaloid | H6H | medium | borderline |
| Cr_18556.1|Cr_LG_7:8950571-8953579|plus| | Alkaloid | H6H | low | borderline |
| Cr_18645.1|Cr_LG_7:10207613-10208604|minus| | Alkaloid | H6H | low | borderline |
| Cr_19237.1|Cr_LG_7:22584886-22589008|plus| | Alkaloid | H6H | medium | borderline |
| Cr_19655.1|Cr_LG_7:27861979-27862554|minus| | Alkaloid | H6H | low | borderline |
| Cr_19798.1|Cr_LG_7:30204543-30207830|plus| | Alkaloid | H6H | low | borderline |
| Cr_21869.1|Cr_LG_8:16780142-16781676|plus| | Alkaloid | H6H | low | borderline |
| Cr_22053.1|Cr_LG_8:19338557-19340560|plus| | Alkaloid | H6H | high | pass |
| Cr_22342.1|scaffold426:16439-17867|minus| | Alkaloid | H6H | low | borderline |
| Cr_23918.1|scaffold2012:3664-12773|plus| | Alkaloid | H6H | medium | borderline |
| Cr_24869.1|scaffold3347:5987-8131|minus| | Alkaloid | H6H | medium | borderline |
| Cr_25555.1|scaffold6328:409-1087|minus| | Alkaloid | H6H | low | borderline |
| Cr_00841.1|Cr_LG_1:9537298-9540951|minus| | Alkaloid | IO | low | borderline |
| Cr_01389.1|Cr_LG_1:15119821-15124715|plus| | Alkaloid | IO | low | borderline |
| Cr_02880.1|Cr_LG_1:40110592-40115861|plus| | Alkaloid | IO | medium | borderline |
| Cr_03841.1|Cr_LG_2:11422412-11423752|minus| | Alkaloid | IO | medium | borderline |
| Cr_05176.1|Cr_LG_3:1212888-1216300|minus| | Alkaloid | IO | low | borderline |
| Cr_05358.1|Cr_LG_3:3838362-3840068|plus| | Alkaloid | IO | medium | borderline |
| Cr_07154.1|Cr_LG_3:32228088-32228507|minus| | Alkaloid | IO | low | borderline |
| Cr_08363.1|Cr_LG_4:7489894-7491453|plus| | Alkaloid | IO | medium | borderline |
| Cr_09068.1|Cr_LG_4:17885241-17887013|plus| | Alkaloid | IO | medium | borderline |
| Cr_10412.1|Cr_LG_4:34707380-34710814|minus| | Alkaloid | IO | medium | borderline |
| Cr_10700.1|Cr_LG_4:39965920-39967615|plus| | Alkaloid | IO | medium | borderline |
| Cr_14065.1|Cr_LG_5:42810423-42811682|minus| | Alkaloid | IO | low | borderline |
| Cr_15897.1|Cr_LG_6:22081328-22082999|minus| | Alkaloid | IO | low | borderline |
| Cr_15996.1|Cr_LG_6:23028651-23030297|minus| | Alkaloid | IO | medium | borderline |
| Cr_15997.1|Cr_LG_6:23043255-23045310|minus| | Alkaloid | IO | medium | borderline |
| Cr_16313.1|Cr_LG_6:27904601-27906311|plus| | Alkaloid | IO | medium | borderline |
| Cr_18497.1|Cr_LG_7:8243938-8244507|plus| | Alkaloid | IO | high | pass |
| Cr_18666.1|Cr_LG_7:10491830-10493356|plus| | Alkaloid | IO | medium | borderline |
| Cr_19362.1|Cr_LG_7:24771824-24774528|minus| | Alkaloid | IO | high | pass |
| Cr_19364.1|Cr_LG_7:24821957-24823600|plus| | Alkaloid | IO | medium | pass |
| Cr_21062.1|Cr_LG_8:6765115-6768232|minus| | Alkaloid | IO | medium | borderline |
| Cr_21873.1|Cr_LG_8:16842899-16844968|minus| | Alkaloid | IO | medium | borderline |
| Cr_21967.1|Cr_LG_8:18263003-18268279|plus| | Alkaloid | IO | medium | borderline |
| Cr_23143.1|scaffold1328:54516-55154|minus| | Alkaloid | IO | medium | borderline |
| Cr_02816.1|Cr_LG_1:39542740-39544005|plus| | Alkaloid | ISY | medium | pass |