PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

3796
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DWF4/CYP90B1
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Gene Pathway Family Confidence Status
citrus_limon_GWHPCBFQ051431.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ051434.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ051467.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ052555.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ052557.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ053062.1 Steroid DWF4/CYP90B1 medium borderline
citrus_limon_GWHPCBFQ053309.1 Steroid DWF4/CYP90B1 medium borderline
citrus_limon_GWHPCBFQ053976.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054377.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054431.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054441.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054474.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054478.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054604.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054803.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054816.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ054910.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ055758.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ055759.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ055760.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ056260.1 Steroid DWF4/CYP90B1 medium borderline
citrus_limon_GWHPCBFQ058457.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ059014.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ059188.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ061638.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ061887.1 Steroid DWF4/CYP90B1 low borderline
citrus_limon_GWHPCBFQ062305.1 Steroid DWF4/CYP90B1 low borderline