PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

3796
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
citrus_limon_GWHPCBFQ000517.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ001865.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ001867.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ001870.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ002814.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ002896.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ002901.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ004904.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ004931.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ005302.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ005724.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ005794.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ006189.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ008990.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ009979.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ009982.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ009986.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ009987.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ009992.1 Alkaloid G8O/G8H medium pass
citrus_limon_GWHPCBFQ011409.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ015019.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ015068.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ016542.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ016578.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ016753.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ018393.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ018696.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ019574.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ019971.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ020217.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ023264.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ023987.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ025329.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ025717.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ027387.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ027931.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ028199.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ028207.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ028413.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ029020.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ029028.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ033286.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ033899.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ036445.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ036661.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ038164.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ040115.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ040515.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ043009.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ043397.1 Alkaloid G8O/G8H medium borderline