PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

4339
Candidate Protein Records
3796
Pathway-Level Records
9572
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Protein/Isoform Record Pathway Family Confidence Status Best Target
citrus_limon_GWHPCBFQ059621.1 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ059858.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
citrus_limon_GWHPCBFQ060351.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060352.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
citrus_limon_GWHPCBFQ060356.1 Flavonoid F3H medium borderline F3H__00008__sp_Q96330_FLS1_ARATH
citrus_limon_GWHPCBFQ060357.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060358.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
citrus_limon_GWHPCBFQ060360.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN
citrus_limon_GWHPCBFQ060362.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060469.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060518.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060632.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
citrus_limon_GWHPCBFQ060633.1 Flavonoid F3H medium borderline F3H__00006__sp_Q7XZQ7_FL3H_PETCR
citrus_limon_GWHPCBFQ060639.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060862.1 Flavonoid F3H medium borderline F3H__00005__sp_Q7XZQ6_FLS_PETCR
citrus_limon_GWHPCBFQ060874.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ060875.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ061390.1 Flavonoid F3H medium borderline F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
citrus_limon_GWHPCBFQ061924.1 Flavonoid F3H medium borderline F3H__00004__sp_Q7XR84_FL3H3_ORYSJ
citrus_limon_GWHPCBFQ062021.1 Flavonoid F3H low borderline F3H__00001__sp_A0A4D6Q4T7_FL3H2_CROXC
citrus_limon_GWHPCBFQ062084.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ062085.1 Flavonoid F3H medium pass F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ062201.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ062527.1 Flavonoid F3H medium borderline F3H__00007__sp_Q8W2X5_FL3H2_ORYSJ
citrus_limon_GWHPCBFQ062528.1 Flavonoid F3H medium borderline F3H__00009__sp_Q9ZWQ9_FLS_CITUN