PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

3796
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
citrus_limon_GWHPCBFQ044953.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ045047.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ045160.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ046446.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ046447.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ046449.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ046450.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ048064.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ048067.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ048068.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ048307.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ049865.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ049866.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ049867.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ049868.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ049869.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ050900.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ051382.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ051384.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ051400.1 Alkaloid G8O/G8H medium pass
citrus_limon_GWHPCBFQ051416.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054595.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054599.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054602.1 Alkaloid G8O/G8H medium pass
citrus_limon_GWHPCBFQ054803.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054805.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054816.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054910.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054994.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ054995.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055006.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055021.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055023.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055029.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055033.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ055037.1 Alkaloid G8O/G8H medium pass
citrus_limon_GWHPCBFQ056348.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ057682.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ057723.1 Alkaloid G8O/G8H low borderline
citrus_limon_GWHPCBFQ058752.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ058753.1 Alkaloid G8O/G8H medium pass
citrus_limon_GWHPCBFQ059014.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ060669.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ061888.1 Alkaloid G8O/G8H medium borderline
citrus_limon_GWHPCBFQ061889.1 Alkaloid G8O/G8H low borderline