PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

4339
Candidate Protein Records
3796
Pathway-Level Records
9572
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
citrus_limon_GWHPCBFQ028436.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ028601.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029336.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029337.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029338.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029340.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029341.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029342.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029343.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029344.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029345.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029346.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029347.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029434.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029515.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029518.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ029720.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ030265.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ031038.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ031773.1 Flavonoid F3H medium pass
citrus_limon_GWHPCBFQ031774.1 Flavonoid F3H medium pass
citrus_limon_GWHPCBFQ031775.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ031785.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ032384.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ032703.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ033231.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ033232.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ033785.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ033959.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034652.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034653.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034655.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034656.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034657.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034658.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034659.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034661.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034665.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ034734.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ035064.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ035083.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ035562.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ035578.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ036129.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ036842.1 Flavonoid F3H low borderline
citrus_limon_GWHPCBFQ036843.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ037759.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ038350.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ039043.1 Flavonoid F3H medium borderline
citrus_limon_GWHPCBFQ039283.1 Flavonoid F3H medium borderline