PlantSME Plant secondary metabolism enzyme database

Citrus limon (citrus_limon)

Imported from atlas release summary for Citrus limon.

4339
Candidate Protein Records
3796
Pathway-Level Records
9572
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1086 19 BAHD (433) View species results
Alkaloid pathway 886 25 7DLGT (159) View species results
Phenylpropanoid pathway 771 11 POD (258) View species results
Flavonoid pathway 425 12 UFGT (253) View species results
Rosmarinic acid pathway 407 7 C4H (173) View species results
Steroid pathway 221 12 CAS (121) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 3965 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 734 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
citrus_limon_GWHPCBFQ058804.1 Phenylpropanoid CSE medium pass
citrus_limon_GWHPCBFQ061953.1 Phenylpropanoid CSE medium pass
citrus_limon_GWHPCBFQ061955.1 Phenylpropanoid CSE medium pass
citrus_limon_GWHPCBFQ000251.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ002896.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ002901.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ003284.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ003285.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ006028.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ006029.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ006034.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ006036.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ008306.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ009838.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ009844.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ011315.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ015062.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ018694.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ019971.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ027654.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ028209.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ029014.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ029020.1 Phenylpropanoid F5H/CYP84A low borderline
citrus_limon_GWHPCBFQ029028.1 Phenylpropanoid F5H/CYP84A low borderline
citrus_limon_GWHPCBFQ029035.1 Phenylpropanoid F5H/CYP84A low borderline
citrus_limon_GWHPCBFQ029200.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ029204.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ033005.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ033571.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ033897.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ034389.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ044574.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ044575.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ045241.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ047435.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ047708.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ051416.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ051909.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ054599.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ054725.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ054803.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ054994.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ055023.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ055026.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ058752.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ061888.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ062127.1 Phenylpropanoid F5H/CYP84A medium borderline
citrus_limon_GWHPCBFQ000219.1 Phenylpropanoid HCT low borderline
citrus_limon_GWHPCBFQ001293.1 Phenylpropanoid HCT medium pass
citrus_limon_GWHPCBFQ001294.1 Phenylpropanoid HCT medium pass