PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1343
Candidate Protein Records
1051
Pathway-Level Records
2563
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Ccapcontig124030192000.1 Alkaloid T3O medium borderline
Ccapcontig124650195540.1 Alkaloid T3O medium borderline
Ccapcontig125290198540.1 Alkaloid T3O medium pass
Ccapcontig125290198550.1 Alkaloid T3O medium pass
Ccapcontig125290198580.1 Alkaloid T3O medium borderline
Ccapcontig125290198590.1 Alkaloid T3O medium borderline
Ccapcontig129170210930.1 Alkaloid T3O medium pass
Ccapcontig133760217870.1 Alkaloid T3O medium pass
Ccapcontig134700221960.1 Alkaloid T3O medium pass
Ccapcontig137460229400.1 Alkaloid T3O medium borderline
Ccapcontig140050235290.1 Alkaloid T3O low borderline
Ccapcontig140560237060.1 Alkaloid T3O medium borderline
Ccapcontig140560237070.1 Alkaloid T3O medium borderline
Ccapcontig142900242230.1 Alkaloid T3O medium pass
Ccapcontig144460245740.1 Alkaloid T3O low borderline
Ccapcontig144580246870.1 Alkaloid T3O medium pass
Ccapcontig144580246880.1 Alkaloid T3O medium pass
Ccapcontig144660247400.1 Alkaloid T3O low borderline
Ccapcontig145710253870.1 Alkaloid T3O medium borderline
Ccapcontig148050259250.1 Alkaloid T3O low borderline
Ccapcontig148110259330.1 Alkaloid T3O medium pass
Ccapcontig151070266570.1 Alkaloid T3O medium borderline
Ccapcontig153100272180.1 Alkaloid T3O medium borderline
Ccapcontig153620273200.1 Alkaloid T3O medium borderline
Ccapcontig159480282880.1 Alkaloid T3O low borderline
Ccapcontig164800292210.1 Alkaloid T3O medium borderline
Ccapcontig164800292230.1 Alkaloid T3O medium borderline
Ccapcontig079160055950.1 Alkaloid TDC medium borderline
Ccapcontig142900242240.1 Alkaloid TDC low borderline
Ccapcontig012750004740.1 Alkaloid TRI/TRII low borderline
Ccapcontig064610028240.1 Alkaloid TRI/TRII medium pass
Ccapcontig069130034990.1 Alkaloid TRI/TRII medium pass
Ccapcontig074220044540.1 Alkaloid TRI/TRII low borderline
Ccapcontig096060094480.1 Alkaloid TRI/TRII medium pass
Ccapcontig100380111830.1 Alkaloid TRI/TRII medium pass
Ccapcontig108610144050.1 Alkaloid TRI/TRII medium pass
Ccapcontig108610144060.1 Alkaloid TRI/TRII medium pass
Ccapcontig111600159620.1 Alkaloid TRI/TRII medium borderline
Ccapcontig131510213610.1 Alkaloid TRI/TRII medium pass
Ccapcontig132560215120.1 Alkaloid TRI/TRII low borderline
Ccapcontig132570215150.1 Alkaloid TRI/TRII low borderline
Ccapcontig132820216200.1 Alkaloid TRI/TRII low borderline
Ccapcontig132820216210.1 Alkaloid TRI/TRII medium pass
Ccapcontig135540223370.1 Alkaloid TRI/TRII medium pass
Ccapcontig135540223380.1 Alkaloid TRI/TRII low borderline
Ccapcontig135550223400.1 Alkaloid TRI/TRII low borderline
Ccapcontig137220228460.1 Alkaloid TRI/TRII medium pass
Ccapcontig097270100080.1 Alkaloid TYDC_DDC medium borderline
Ccapcontig110690153980.1 Alkaloid TYDC_DDC medium borderline
Ccapcontig110690154000.1 Alkaloid TYDC_DDC medium borderline