PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1051
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Ccapcontig074330044850.1 Rosmarinic Acid C4H low borderline
Ccapcontig075630047240.1 Rosmarinic Acid C4H low borderline
Ccapcontig075630047250.1 Rosmarinic Acid C4H low borderline
Ccapcontig075910047890.1 Rosmarinic Acid C4H low borderline
Ccapcontig079950057440.1 Rosmarinic Acid C4H low borderline
Ccapcontig080400058330.1 Rosmarinic Acid C4H low borderline
Ccapcontig080930059600.1 Rosmarinic Acid C4H low borderline
Ccapcontig080960059890.1 Rosmarinic Acid C4H low borderline
Ccapcontig081140060800.1 Rosmarinic Acid C4H low borderline
Ccapcontig083580066430.1 Rosmarinic Acid C4H low borderline
Ccapcontig084290067720.1 Rosmarinic Acid C4H low borderline
Ccapcontig087030072500.1 Rosmarinic Acid C4H low borderline
Ccapcontig088440074400.1 Rosmarinic Acid C4H low borderline
Ccapcontig089250076130.1 Rosmarinic Acid C4H low borderline
Ccapcontig089250076140.1 Rosmarinic Acid C4H low borderline
Ccapcontig090870079360.1 Rosmarinic Acid C4H low borderline
Ccapcontig092000082160.1 Rosmarinic Acid C4H low borderline
Ccapcontig092240083390.1 Rosmarinic Acid C4H low borderline
Ccapcontig093000085900.1 Rosmarinic Acid C4H low borderline
Ccapcontig094650089200.1 Rosmarinic Acid C4H low borderline
Ccapcontig095660092930.1 Rosmarinic Acid C4H low borderline
Ccapcontig095660092940.1 Rosmarinic Acid C4H low borderline
Ccapcontig096310095570.1 Rosmarinic Acid C4H low borderline
Ccapcontig097400100650.1 Rosmarinic Acid C4H low borderline
Ccapcontig099530108720.1 Rosmarinic Acid C4H medium pass
Ccapcontig100780113340.1 Rosmarinic Acid C4H low borderline
Ccapcontig100780113350.1 Rosmarinic Acid C4H low borderline
Ccapcontig100780113360.1 Rosmarinic Acid C4H low borderline
Ccapcontig102460118290.1 Rosmarinic Acid C4H low borderline
Ccapcontig102460118300.1 Rosmarinic Acid C4H low borderline
Ccapcontig102660119120.1 Rosmarinic Acid C4H low borderline
Ccapcontig103070120280.1 Rosmarinic Acid C4H low borderline
Ccapcontig103700125120.1 Rosmarinic Acid C4H medium pass
Ccapcontig104310128750.1 Rosmarinic Acid C4H medium pass
Ccapcontig104320128770.1 Rosmarinic Acid C4H low borderline
Ccapcontig105260131360.1 Rosmarinic Acid C4H low borderline
Ccapcontig105540133530.1 Rosmarinic Acid C4H low borderline
Ccapcontig107980142300.1 Rosmarinic Acid C4H low borderline
Ccapcontig107980142310.1 Rosmarinic Acid C4H low borderline
Ccapcontig107990142320.1 Rosmarinic Acid C4H low borderline
Ccapcontig108710145180.1 Rosmarinic Acid C4H low borderline
Ccapcontig110150151570.1 Rosmarinic Acid C4H low borderline
Ccapcontig111110156120.1 Rosmarinic Acid C4H low borderline
Ccapcontig111110156130.1 Rosmarinic Acid C4H low borderline
Ccapcontig111110156140.1 Rosmarinic Acid C4H low borderline
Ccapcontig111110156150.1 Rosmarinic Acid C4H low borderline
Ccapcontig111320157910.1 Rosmarinic Acid C4H low borderline
Ccapcontig111560159460.1 Rosmarinic Acid C4H low borderline
Ccapcontig111870161740.1 Rosmarinic Acid C4H low borderline
Ccapcontig114830168440.1 Rosmarinic Acid C4H medium pass