PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1051
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
Ccapcontig160520285640.1 Alkaloid 7DLGT low borderline
Ccapcontig075550047160.1 Alkaloid 7DLH low borderline
Ccapcontig077380051750.1 Alkaloid 7DLH low borderline
Ccapcontig080930059600.1 Alkaloid 7DLH medium borderline
Ccapcontig097400100650.1 Alkaloid 7DLH medium borderline
Ccapcontig097600101860.1 Alkaloid 7DLH medium borderline
Ccapcontig097870102550.1 Alkaloid 7DLH medium borderline
Ccapcontig102660119120.1 Alkaloid 7DLH medium borderline
Ccapcontig104010127450.1 Alkaloid 7DLH medium borderline
Ccapcontig111060155910.1 Alkaloid 7DLH medium borderline
Ccapcontig112970164410.1 Alkaloid 7DLH medium borderline
Ccapcontig124610195320.1 Alkaloid 7DLH medium pass
Ccapcontig140480236740.1 Alkaloid 7DLH medium borderline
Ccapcontig148980260480.1 Alkaloid 7DLH medium borderline
Ccapcontig150450264580.1 Alkaloid 7DLH medium borderline
Ccapcontig060860022320.1 Alkaloid 8HGO medium borderline
Ccapcontig061580024170.1 Alkaloid 8HGO medium pass
Ccapcontig061580024180.1 Alkaloid 8HGO medium pass
Ccapcontig078640055170.1 Alkaloid 8HGO medium pass
Ccapcontig083130065320.1 Alkaloid 8HGO low borderline
Ccapcontig103680124940.1 Alkaloid 8HGO low borderline
Ccapcontig106490138050.1 Alkaloid 8HGO medium pass
Ccapcontig128240205040.1 Alkaloid 8HGO low borderline
Ccapcontig132430214710.1 Alkaloid 8HGO medium pass
Ccapcontig135670223900.1 Alkaloid 8HGO medium pass
Ccapcontig144350245120.1 Alkaloid 8HGO medium pass
Ccapcontig144350245140.1 Alkaloid 8HGO medium pass
Ccapcontig144350245160.1 Alkaloid 8HGO medium pass
Ccapcontig144380245290.1 Alkaloid 8HGO medium pass
Ccapcontig144420245460.1 Alkaloid 8HGO medium pass
Ccapcontig161210286730.1 Alkaloid 8HGO medium pass
Ccapcontig164670292080.1 Alkaloid 8HGO medium borderline
Ccapcontig111320157750.1 Alkaloid ADC medium pass
Ccapcontig117400174230.1 Alkaloid ADC medium pass
Ccapcontig133940218770.1 Alkaloid BBE low borderline
Ccapcontig156800278490.1 Alkaloid BBE low borderline
Ccapcontig011880004250.1 Alkaloid CNMT low borderline
Ccapcontig077260050770.1 Alkaloid CNMT low borderline
Ccapcontig078080054030.1 Alkaloid CNMT low borderline
Ccapcontig081140060860.1 Alkaloid CNMT low borderline
Ccapcontig098430103700.1 Alkaloid CNMT low borderline
Ccapcontig111790161350.1 Alkaloid CNMT low borderline
Ccapcontig115840170610.1 Alkaloid CNMT medium borderline
Ccapcontig124850196950.1 Alkaloid CNMT medium borderline
Ccapcontig144580246570.1 Alkaloid CNMT low borderline
Ccapcontig146600256700.1 Alkaloid CNMT low borderline
Ccapcontig054420017750.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig074650045300.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig074660045330.1 Alkaloid CODM/T6ODM medium borderline
Ccapcontig077990053410.1 Alkaloid CODM/T6ODM medium borderline