PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1051
Family-Level Assignments
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Family-Level Assignments Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Family-level assignments Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
Ccapcontig102660119120.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig104310128750.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig105890135180.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig107980142310.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig107990142320.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig110150151570.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig111060155910.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig111110156120.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig111110156130.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig111110156140.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig111110156150.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig111560159460.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig112440162950.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig112970164410.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig114860168460.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig114860168470.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig118470179400.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig124030192000.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig126090201390.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig128590207760.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig128600207770.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig128600207780.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig129160210910.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig129170210930.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig131340213300.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig133760217870.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig134700221960.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig140050235290.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig140560237060.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig140560237070.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig146830257320.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig148050259250.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig148980260480.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig153100272180.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig154730274810.1 Steroid DWF4/CYP90B1 medium borderline
Ccapcontig159480282880.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig164810292240.1 Steroid DWF4/CYP90B1 low borderline
Ccapcontig075740047600.1 Steroid DWF5 low borderline
Ccapcontig109250149820.1 Steroid DWF5 medium pass
Ccapcontig098680105490.1 Steroid DWF7 low borderline
Ccapcontig103400122740.1 Steroid DWF7 medium pass
Ccapcontig069720036110.1 Steroid FK medium borderline
Ccapcontig100760113190.1 Steroid FK high pass
Ccapcontig088870075440.1 Steroid HYD1 high pass
Ccapcontig108640144700.1 Steroid HYD1 low borderline
Ccapcontig123610190940.1 Steroid HYD1 low borderline
Ccapcontig128250205290.1 Steroid HYD1 high pass
Ccapcontig080580058660.1 Steroid ROT3/CYP90C1 low borderline
Ccapcontig092240083390.1 Steroid ROT3/CYP90C1 medium borderline
Ccapcontig104160128280.1 Steroid ROT3/CYP90C1 medium borderline