PlantSME Plant secondary metabolism enzyme database

Corchorus capsularis (corchorus_capsularis)

Imported from atlas release summary for Corchorus capsularis.

1343
Candidate Protein Records
1051
Pathway-Level Records
2563
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 303 18 BAHD (113) View species results
Alkaloid pathway 241 22 NMT (42) View species results
Phenylpropanoid pathway 223 12 POD (99) View species results
Flavonoid pathway 140 11 UFGT (74) View species results
Rosmarinic acid pathway 83 7 4CL (25) View species results
Steroid pathway 61 9 CAS (32) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 825 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 191 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Ccapcontig105360131900.1 Terpenoid HDS/IspG low borderline
Ccapcontig124230193230.1 Terpenoid HDS/IspG medium pass
Ccapcontig124230193250.1 Terpenoid HDS/IspG medium pass
Ccapcontig063610027200.1 Terpenoid HMGR medium pass
Ccapcontig115080169120.1 Terpenoid HMGR medium pass
Ccapcontig086530071760.1 Terpenoid HMGS high pass
Ccapcontig095540092290.1 Terpenoid HMGS high pass
Ccapcontig105510133360.1 Terpenoid HMGS low borderline
Ccapcontig142110240450.1 Terpenoid HMGS low borderline
Ccapcontig106560138170.1 Terpenoid IDI medium pass
Ccapcontig109190149430.1 Terpenoid MCT/IspD high pass
Ccapcontig103960127090.1 Terpenoid MDS/IspF high pass
Ccapcontig082850064480.1 Terpenoid MVD medium pass
Ccapcontig099160107330.1 Terpenoid MVD low borderline
Ccapcontig108600143650.1 Terpenoid MVD low borderline
Ccapcontig069730036160.1 Terpenoid MVK low borderline
Ccapcontig091780081670.1 Terpenoid MVK low borderline
Ccapcontig151930270070.1 Terpenoid MVK low borderline
Ccapcontig091740081540.1 Terpenoid PMK medium pass
Ccapcontig004810001390.1 Terpenoid TPS medium pass
Ccapcontig050140014890.1 Terpenoid TPS medium pass
Ccapcontig062200025230.1 Terpenoid TPS medium pass
Ccapcontig067140031250.1 Terpenoid TPS medium pass
Ccapcontig073860043990.1 Terpenoid TPS medium pass
Ccapcontig073870044000.1 Terpenoid TPS medium pass
Ccapcontig073880044020.1 Terpenoid TPS medium pass
Ccapcontig077900053000.1 Terpenoid TPS medium pass
Ccapcontig079880057330.1 Terpenoid TPS medium pass
Ccapcontig080830059200.1 Terpenoid TPS medium pass
Ccapcontig080830059210.1 Terpenoid TPS low borderline
Ccapcontig080830059220.1 Terpenoid TPS low borderline
Ccapcontig084420067850.1 Terpenoid TPS low borderline
Ccapcontig084530067970.1 Terpenoid TPS medium pass
Ccapcontig106200136820.1 Terpenoid TPS medium pass
Ccapcontig106210136830.1 Terpenoid TPS medium pass
Ccapcontig106220136850.1 Terpenoid TPS low borderline
Ccapcontig107200139760.1 Terpenoid TPS medium pass
Ccapcontig108790145700.1 Terpenoid TPS medium pass
Ccapcontig108800145710.1 Terpenoid TPS medium pass
Ccapcontig108810145730.1 Terpenoid TPS medium pass
Ccapcontig108930146890.1 Terpenoid TPS low borderline
Ccapcontig121090185340.1 Terpenoid TPS medium pass
Ccapcontig125140197890.1 Terpenoid TPS medium pass
Ccapcontig131350213330.1 Terpenoid TPS medium pass
Ccapcontig134840222140.1 Terpenoid TPS medium pass
Ccapcontig137530229790.1 Terpenoid TPS medium pass
Ccapcontig137600229940.1 Terpenoid TPS medium pass
Ccapcontig144060244100.1 Terpenoid TPS medium pass
Ccapcontig145750254510.1 Terpenoid TPS medium pass
Ccapcontig145750254520.1 Terpenoid TPS medium pass