Echinochloa oryzicola (echinochloa_oryzicola)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Terpenoid pathway 25.73% Phenylpropanoid pathway 24.36% Alkaloid pathway 21.91% Flavonoid pathway 11.41% Rosmarinic acid pathway 10.89% Steroid pathway 5.71%

Family Distribution

2857 Candidate Genes

C4H 6.99% C3'H/CYP98A 6.75% BAHD 6.12% POD 4.55% T3O 4.04% CYP76 3.82% IFS 3.78% 4CL 3.65%

Other Families 60.3%

More Families (98)

F3'H/CYP75B 229 2.81% DWF4/CYP90B1 216 2.65% BR6OX2/CYP85A2 206 2.53% UGT 192 2.36% CYP71 182 2.24% F3H 177 2.17% 7DLGT 169 2.08% UFGT 166 2.04% NMT 140 1.72% SMT1/SMT2/SMT3 129 1.58% STR 120 1.47% H6H 91 1.12% CODM/T6ODM 87 1.07% SLS 86 1.06% LAC 86 1.06% PYKS 85 1.04% CAD 85 1.04% HCT 85 1.04% COMT 84 1.03% G8O/G8H 83 1.02% TRI/TRII 83 1.02% RAS 82 1.01% CCR 81 1.0% T16H 79 0.97% PMT 75 0.92% CSE 74 0.91% CAS 73 0.9% TPS 73 0.9% IFR 71 0.87% 16OMT 70 0.86% NCS 69 0.85% SGD 67 0.82% GES 64 0.79% CYP90D1 64 0.79% FNS 63 0.77% F5H/CYP84A 62 0.76% ANR 61 0.75% GS 52 0.64% CHS 51 0.63% PAL 51 0.63% F3'5'H/CYP75A 50 0.61% CYP51G1 50 0.61% CPD/CYP90A1 47 0.58% COR 46 0.57% DFR 42 0.52% 7DLH 31 0.38% IO 31 0.38% TYDC_DDC 28 0.34% BBE 28 0.34% BR6OX1/CYP85A1 28 0.34% CNMT 27 0.33% CYP80B1 23 0.28% 8HGO 23 0.28% FPPS 22 0.27% CYP719 18 0.22% ANS/LDOX 17 0.21% TAT 17 0.21% MVK 16 0.2% GGPPS 16 0.2% CPR 15 0.18% MPO 14 0.17% LAMT 14 0.17% ROT3/CYP90C1 14 0.17% ISY 13 0.16% XMT_MXMT_DXMT 12 0.15% TDC 12 0.15% CCoAOMT 12 0.15% SMO1/SMO2 12 0.15% HPPR 11 0.14% CHI 10 0.12% SQS/FDFT1 10 0.12% AACT 10 0.12% MVD 10 0.12% DET2 9 0.11% HMGR 9 0.11% MCT/IspD 8 0.1% CYP80F1 7 0.09% DWF1 7 0.09% IDI 7 0.09% ODC 6 0.07% HYD1 6 0.07% DXS 6 0.07% ADC 5 0.06% FLS 5 0.06% HDR/IspH 5 0.06% 6OMT_4OMT_SOMT 4 0.05% FK 4 0.05% HMGS 4 0.05% MDS/IspF 4 0.05% SQE 3 0.04% PMK 3 0.04% CMK/IspE 3 0.04% DWF7 2 0.02% CPI1 2 0.02% DWF5 2 0.02% DXR 2 0.02% HDS/IspG 2 0.02% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Terpenoid pathway	735	19	BAHD (329)	View species results
Phenylpropanoid pathway	696	12	POD (326)	View species results
Alkaloid pathway	626	23	7DLGT (78)	View species results
Flavonoid pathway	326	14	UFGT (144)	View species results
Rosmarinic acid pathway	311	7	C4H (166)	View species results
Steroid pathway	163	13	SMT1/SMT2/SMT3 (71)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	3572	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	665	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: CAS

Gene	Pathway	Family	Confidence	Status	Best Target
echinochloa_oryzicola_GWHPBDNS049607	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS054529	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
echinochloa_oryzicola_GWHPBDNS054530	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
echinochloa_oryzicola_GWHPBDNS054531	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
echinochloa_oryzicola_GWHPBDNS055871	Steroid	CAS	medium	pass	CAS__00014__sp_Q9SXV6_CAS1_GLYGL
echinochloa_oryzicola_GWHPBDNS057386	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS057571	Steroid	CAS	medium	pass	CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
echinochloa_oryzicola_GWHPBDNS057572	Steroid	CAS	medium	pass	CAS__00014__sp_Q9SXV6_CAS1_GLYGL
echinochloa_oryzicola_GWHPBDNS057575	Steroid	CAS	medium	pass	CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
echinochloa_oryzicola_GWHPBDNS057576	Steroid	CAS	medium	pass	CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
echinochloa_oryzicola_GWHPBDNS058128	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
echinochloa_oryzicola_GWHPBDNS058740	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS059349	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS060369	Steroid	CAS	medium	pass	CAS__00012__sp_Q9FN48_CAS_ARATH
echinochloa_oryzicola_GWHPBDNS061397	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS061408	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS062005	Steroid	CAS	medium	pass	CAS__00004__sp_O82139_CAS1_PANGI
echinochloa_oryzicola_GWHPBDNS064073	Steroid	CAS	medium	pass	CAS__00007__sp_Q43153_CYSC_SPIOL
echinochloa_oryzicola_GWHPBDNS064283	Steroid	CAS	medium	pass	CAS__00009__sp_Q6Z2X6_CAS_ORYSJ
echinochloa_oryzicola_GWHPBDNS066594	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS067549	Steroid	CAS	medium	pass	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS068038	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA
echinochloa_oryzicola_GWHPBDNS068040	Steroid	CAS	low	borderline	CAS__00003__sp_H8ZM73_CAS_ABIBA