PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CNMT
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS003235 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS006626 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS007441 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS011034 Alkaloid CNMT medium pass
echinochloa_oryzicola_GWHPBDNS012751 Alkaloid CNMT medium pass
echinochloa_oryzicola_GWHPBDNS014006 Alkaloid CNMT medium pass
echinochloa_oryzicola_GWHPBDNS014035 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS015093 Alkaloid CNMT medium borderline
echinochloa_oryzicola_GWHPBDNS020687 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS021204 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS021207 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS021278 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS022710 Alkaloid CNMT medium borderline
echinochloa_oryzicola_GWHPBDNS026791 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS040746 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS045724 Alkaloid CNMT medium pass
echinochloa_oryzicola_GWHPBDNS048172 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS048177 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS054554 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS054634 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS056227 Alkaloid CNMT medium borderline
echinochloa_oryzicola_GWHPBDNS056228 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS058461 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS062925 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS062933 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS067104 Alkaloid CNMT low borderline
echinochloa_oryzicola_GWHPBDNS068295 Alkaloid CNMT low borderline