PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IO
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS001956 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS002324 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS003985 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS005837 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS008390 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS009499 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS025204 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS028916 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS029359 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS031928 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS032669 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS035260 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS038460 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS041773 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS044923 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS045904 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS048169 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS048801 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS048840 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS049908 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS051637 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS053166 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS054133 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS057268 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS061370 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS062235 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS062295 Alkaloid IO low borderline
echinochloa_oryzicola_GWHPBDNS063166 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS063643 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS067053 Alkaloid IO medium borderline
echinochloa_oryzicola_GWHPBDNS068350 Alkaloid IO medium borderline