PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS000228 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS000231 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS000408 Flavonoid IFS medium pass
echinochloa_oryzicola_GWHPBDNS000829 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS000831 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS001107 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS001356 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS001584 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS001797 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS002048 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS002324 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS002325 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003105 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003289 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS003299 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003300 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003548 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003549 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003551 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS003566 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS004016 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004017 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004018 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004193 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004569 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004621 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004938 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS004940 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005206 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005308 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS005389 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005390 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005472 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005552 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS005671 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS005672 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS005675 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS005895 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS006465 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS006658 Flavonoid IFS medium borderline
echinochloa_oryzicola_GWHPBDNS007024 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007929 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007932 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007933 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007934 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007937 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007938 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007939 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS007941 Flavonoid IFS low borderline
echinochloa_oryzicola_GWHPBDNS009056 Flavonoid IFS low borderline