PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
echinochloa_oryzicola_GWHPBDNS048415 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS048416 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS048417 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS048418 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS048590 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS050780 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS052148 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS052985 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
echinochloa_oryzicola_GWHPBDNS052987 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
echinochloa_oryzicola_GWHPBDNS056897 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS058836 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS060270 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS061727 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
echinochloa_oryzicola_GWHPBDNS062343 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS063719 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS064134 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS064138 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS064144 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS064146 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS064149 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS066141 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS066143 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS066289 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
echinochloa_oryzicola_GWHPBDNS067753 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH