PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: H6H
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS036527 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS036678 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS036977 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS038685 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS038943 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS040528 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS040671 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS040749 Alkaloid H6H medium pass
echinochloa_oryzicola_GWHPBDNS042022 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS042511 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS042871 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS048045 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS048621 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS050926 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS051157 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS051546 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS051547 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS052091 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS052685 Alkaloid H6H medium pass
echinochloa_oryzicola_GWHPBDNS054807 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS054949 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS055255 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS056900 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS057875 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS060789 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS060991 Alkaloid H6H medium pass
echinochloa_oryzicola_GWHPBDNS061357 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS061960 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS062703 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS062830 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS063007 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS064202 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS064210 Alkaloid H6H medium borderline
echinochloa_oryzicola_GWHPBDNS065172 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS065779 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS065780 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS066204 Alkaloid H6H high pass
echinochloa_oryzicola_GWHPBDNS066348 Alkaloid H6H low borderline
echinochloa_oryzicola_GWHPBDNS067452 Alkaloid H6H medium pass
echinochloa_oryzicola_GWHPBDNS067781 Alkaloid H6H medium pass
echinochloa_oryzicola_GWHPBDNS067847 Alkaloid H6H low borderline