PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS001148 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS001450 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS004448 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS005409 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS005657 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS005860 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS006396 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS006784 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS007841 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS007842 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS009798 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS010663 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS010985 Alkaloid PMT medium borderline
echinochloa_oryzicola_GWHPBDNS011722 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS011796 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS012188 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS014058 Alkaloid PMT medium borderline
echinochloa_oryzicola_GWHPBDNS015909 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS017567 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS017805 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS017829 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS019829 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS020405 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS021421 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS021423 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS021424 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS022440 Alkaloid PMT medium borderline
echinochloa_oryzicola_GWHPBDNS022793 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS022795 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS024363 Alkaloid PMT medium borderline
echinochloa_oryzicola_GWHPBDNS029774 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS029862 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS030904 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS030907 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS030915 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS030921 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS031190 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS032929 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS034900 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS035674 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS036079 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS038911 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS038944 Alkaloid PMT low borderline
echinochloa_oryzicola_GWHPBDNS039391 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS039446 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS040145 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS040146 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS041153 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS041154 Alkaloid PMT medium pass
echinochloa_oryzicola_GWHPBDNS041268 Alkaloid PMT low borderline