Echinochloa oryzicola (echinochloa_oryzicola)
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Imported from atlas release summary for Echinochloa oryzicola.
2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
/
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
2857
Candidate Genes
C4H
6.99%
C3'H/CYP98A
6.75%
BAHD
6.12%
POD
4.55%
T3O
4.04%
CYP76
3.82%
IFS
3.78%
4CL
3.65%
Other Families
60.3%
More Families (98)
F3'H/CYP75B
229
2.81%
DWF4/CYP90B1
216
2.65%
BR6OX2/CYP85A2
206
2.53%
UGT
192
2.36%
CYP71
182
2.24%
F3H
177
2.17%
7DLGT
169
2.08%
UFGT
166
2.04%
NMT
140
1.72%
SMT1/SMT2/SMT3
129
1.58%
STR
120
1.47%
H6H
91
1.12%
CODM/T6ODM
87
1.07%
SLS
86
1.06%
LAC
86
1.06%
PYKS
85
1.04%
CAD
85
1.04%
HCT
85
1.04%
COMT
84
1.03%
G8O/G8H
83
1.02%
TRI/TRII
83
1.02%
RAS
82
1.01%
CCR
81
1.0%
T16H
79
0.97%
PMT
75
0.92%
CSE
74
0.91%
CAS
73
0.9%
TPS
73
0.9%
IFR
71
0.87%
16OMT
70
0.86%
NCS
69
0.85%
SGD
67
0.82%
GES
64
0.79%
CYP90D1
64
0.79%
FNS
63
0.77%
F5H/CYP84A
62
0.76%
ANR
61
0.75%
GS
52
0.64%
CHS
51
0.63%
PAL
51
0.63%
F3'5'H/CYP75A
50
0.61%
CYP51G1
50
0.61%
CPD/CYP90A1
47
0.58%
COR
46
0.57%
DFR
42
0.52%
7DLH
31
0.38%
IO
31
0.38%
TYDC_DDC
28
0.34%
BBE
28
0.34%
BR6OX1/CYP85A1
28
0.34%
CNMT
27
0.33%
CYP80B1
23
0.28%
8HGO
23
0.28%
FPPS
22
0.27%
CYP719
18
0.22%
ANS/LDOX
17
0.21%
TAT
17
0.21%
MVK
16
0.2%
GGPPS
16
0.2%
CPR
15
0.18%
MPO
14
0.17%
LAMT
14
0.17%
ROT3/CYP90C1
14
0.17%
ISY
13
0.16%
XMT_MXMT_DXMT
12
0.15%
TDC
12
0.15%
CCoAOMT
12
0.15%
SMO1/SMO2
12
0.15%
HPPR
11
0.14%
CHI
10
0.12%
SQS/FDFT1
10
0.12%
AACT
10
0.12%
MVD
10
0.12%
DET2
9
0.11%
HMGR
9
0.11%
MCT/IspD
8
0.1%
CYP80F1
7
0.09%
DWF1
7
0.09%
IDI
7
0.09%
ODC
6
0.07%
HYD1
6
0.07%
DXS
6
0.07%
ADC
5
0.06%
FLS
5
0.06%
HDR/IspH
5
0.06%
6OMT_4OMT_SOMT
4
0.05%
FK
4
0.05%
HMGS
4
0.05%
MDS/IspF
4
0.05%
SQE
3
0.04%
PMK
3
0.04%
CMK/IspE
3
0.04%
DWF7
2
0.02%
CPI1
2
0.02%
DWF5
2
0.02%
DXR
2
0.02%
HDS/IspG
2
0.02%
GPPS
1
0.01%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 735 | 19 | BAHD (329) | View species results |
| Phenylpropanoid pathway | 696 | 12 | POD (326) | View species results |
| Alkaloid pathway | 626 | 23 | 7DLGT (78) | View species results |
| Flavonoid pathway | 326 | 14 | UFGT (144) | View species results |
| Rosmarinic acid pathway | 311 | 7 | C4H (166) | View species results |
| Steroid pathway | 163 | 13 | SMT1/SMT2/SMT3 (71) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 3572 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 665 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: POD
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| echinochloa_oryzicola_GWHPBDNS000213 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| echinochloa_oryzicola_GWHPBDNS000214 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS000722 | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |
| echinochloa_oryzicola_GWHPBDNS000791 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| echinochloa_oryzicola_GWHPBDNS000792 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| echinochloa_oryzicola_GWHPBDNS001295 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| echinochloa_oryzicola_GWHPBDNS001316 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS002508 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| echinochloa_oryzicola_GWHPBDNS002542 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS002543 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS002705 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS002868 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| echinochloa_oryzicola_GWHPBDNS002871 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| echinochloa_oryzicola_GWHPBDNS003118 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003119 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003246 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003284 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| echinochloa_oryzicola_GWHPBDNS003560 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003561 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003562 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003563 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003619 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| echinochloa_oryzicola_GWHPBDNS003746 | Phenylpropanoid | POD | medium | pass | POD__00006__sp_O22850_GPX3_ARATH |
| echinochloa_oryzicola_GWHPBDNS003751 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| echinochloa_oryzicola_GWHPBDNS003888 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS004090 | Phenylpropanoid | POD | medium | pass | POD__00010__sp_P84516_PER1_SORBI |
| echinochloa_oryzicola_GWHPBDNS004632 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS004634 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS004635 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS004657 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| echinochloa_oryzicola_GWHPBDNS004658 | Phenylpropanoid | POD | medium | pass | POD__00024__sp_Q9SCX8_PPA17_ARATH |
| echinochloa_oryzicola_GWHPBDNS004956 | Phenylpropanoid | POD | medium | pass | POD__00012__sp_Q10N21_APX1_ORYSJ |
| echinochloa_oryzicola_GWHPBDNS005526 | Phenylpropanoid | POD | medium | pass | POD__00001__sp_A5H452_PER70_MAIZE |
| echinochloa_oryzicola_GWHPBDNS005824 | Phenylpropanoid | POD | medium | pass | POD__00019__sp_Q949Y3_PPA26_ARATH |
| echinochloa_oryzicola_GWHPBDNS005917 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| echinochloa_oryzicola_GWHPBDNS006253 | Phenylpropanoid | POD | medium | pass | POD__00028__sp_Q9ZVD5_AGO4_ARATH |
| echinochloa_oryzicola_GWHPBDNS006282 | Phenylpropanoid | POD | medium | pass | POD__00027__sp_Q9XIV8_PERN1_TOBAC |
| echinochloa_oryzicola_GWHPBDNS006309 | Phenylpropanoid | POD | low | borderline | POD__00023__sp_Q9M7T0_PRX2F_ARATH |
| echinochloa_oryzicola_GWHPBDNS006340 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS006341 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS006342 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS006343 | Phenylpropanoid | POD | medium | pass | POD__00021__sp_Q9LEH3_PER15_IPOBA |
| echinochloa_oryzicola_GWHPBDNS006800 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006801 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006805 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006964 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006966 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006967 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006968 | Phenylpropanoid | POD | medium | pass | POD__00002__sp_A5H8G4_PER1_MAIZE |
| echinochloa_oryzicola_GWHPBDNS006982 | Phenylpropanoid | POD | low | borderline | POD__00001__sp_A5H452_PER70_MAIZE |