PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS001214 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS001600 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS001683 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS001971 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS002381 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS003493 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS004152 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS004274 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS004557 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS004695 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS005807 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS007412 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS007414 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS011003 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS011864 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS012667 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS013342 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS013343 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS013344 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS014043 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS014845 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015201 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015409 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015411 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015412 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015415 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS015417 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015418 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS015575 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS015674 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS016102 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS017550 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS018140 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS021870 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS021874 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS021877 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS023380 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS024125 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS027378 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS027910 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS031349 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS033155 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS034414 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS035073 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS035164 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS035486 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS036852 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS037703 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS037856 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS038151 Alkaloid PYKS low borderline