PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PYKS
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS038276 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS039625 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS040716 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS040717 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS041228 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS044943 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS046307 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS046308 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS046310 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS047469 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS048249 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048251 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048252 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048253 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048671 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048672 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048674 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS048677 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048679 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS048701 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS049045 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS049046 Alkaloid PYKS high pass
echinochloa_oryzicola_GWHPBDNS049066 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS049170 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS049324 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS051553 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS051705 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS055318 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS055320 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS058024 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS060398 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS060929 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS064552 Alkaloid PYKS low borderline
echinochloa_oryzicola_GWHPBDNS066196 Alkaloid PYKS medium pass
echinochloa_oryzicola_GWHPBDNS066349 Alkaloid PYKS low borderline