Echinochloa oryzicola (echinochloa_oryzicola)

This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Download candidate protein FASTA for this species

Pathway Coverage

6 Pathways

Terpenoid pathway 25.73% Phenylpropanoid pathway 24.36% Alkaloid pathway 21.91% Flavonoid pathway 11.41% Rosmarinic acid pathway 10.89% Steroid pathway 5.71%

Family Distribution

8139 Family-Level Calls

C4H 6.99% C3'H/CYP98A 6.75% BAHD 6.12% POD 4.55% T3O 4.04% CYP76 3.82% IFS 3.78% 4CL 3.65%

Other Families 60.3%

More Families (98)

F3'H/CYP75B 229 2.81% DWF4/CYP90B1 216 2.65% BR6OX2/CYP85A2 206 2.53% UGT 192 2.36% CYP71 182 2.24% F3H 177 2.17% 7DLGT 169 2.08% UFGT 166 2.04% NMT 140 1.72% SMT1/SMT2/SMT3 129 1.58% STR 120 1.47% H6H 91 1.12% CODM/T6ODM 87 1.07% SLS 86 1.06% LAC 86 1.06% PYKS 85 1.04% CAD 85 1.04% HCT 85 1.04% COMT 84 1.03% G8O/G8H 83 1.02% TRI/TRII 83 1.02% RAS 82 1.01% CCR 81 1.0% T16H 79 0.97% PMT 75 0.92% CSE 74 0.91% CAS 73 0.9% TPS 73 0.9% IFR 71 0.87% 16OMT 70 0.86% NCS 69 0.85% SGD 67 0.82% GES 64 0.79% CYP90D1 64 0.79% FNS 63 0.77% F5H/CYP84A 62 0.76% ANR 61 0.75% GS 52 0.64% CHS 51 0.63% PAL 51 0.63% F3'5'H/CYP75A 50 0.61% CYP51G1 50 0.61% CPD/CYP90A1 47 0.58% COR 46 0.57% DFR 42 0.52% 7DLH 31 0.38% IO 31 0.38% TYDC_DDC 28 0.34% BBE 28 0.34% BR6OX1/CYP85A1 28 0.34% CNMT 27 0.33% CYP80B1 23 0.28% 8HGO 23 0.28% FPPS 22 0.27% CYP719 18 0.22% ANS/LDOX 17 0.21% TAT 17 0.21% MVK 16 0.2% GGPPS 16 0.2% CPR 15 0.18% MPO 14 0.17% LAMT 14 0.17% ROT3/CYP90C1 14 0.17% ISY 13 0.16% XMT_MXMT_DXMT 12 0.15% TDC 12 0.15% CCoAOMT 12 0.15% SMO1/SMO2 12 0.15% HPPR 11 0.14% CHI 10 0.12% SQS/FDFT1 10 0.12% AACT 10 0.12% MVD 10 0.12% DET2 9 0.11% HMGR 9 0.11% MCT/IspD 8 0.1% CYP80F1 7 0.09% DWF1 7 0.09% IDI 7 0.09% ODC 6 0.07% HYD1 6 0.07% DXS 6 0.07% ADC 5 0.06% FLS 5 0.06% HDR/IspH 5 0.06% 6OMT_4OMT_SOMT 4 0.05% FK 4 0.05% HMGS 4 0.05% MDS/IspF 4 0.05% SQE 3 0.04% PMK 3 0.04% CMK/IspE 3 0.04% DWF7 2 0.02% CPI1 2 0.02% DWF5 2 0.02% DXR 2 0.02% HDS/IspG 2 0.02% GPPS 1 0.01%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Pathway-Level Records	Detected Families	Top family	Results
Terpenoid pathway	735	19	BAHD (329)	View species results
Phenylpropanoid pathway	696	12	POD (326)	View species results
Alkaloid pathway	626	23	7DLGT (78)	View species results
Flavonoid pathway	326	14	UFGT (144)	View species results
Rosmarinic acid pathway	311	7	C4H (166)	View species results
Steroid pathway	163	13	SMT1/SMT2/SMT3 (71)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Detected families	Assignment calls	Included families
P450/oxygenase	24	3572	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	665	BAHD, HCT, RAS

Identification Result List

Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: STR

Protein/Isoform Record	Pathway	Family	Confidence	Status	Best Target
echinochloa_oryzicola_GWHPBDNS055954	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS056119	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS056541	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
echinochloa_oryzicola_GWHPBDNS056546	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
echinochloa_oryzicola_GWHPBDNS057654	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
echinochloa_oryzicola_GWHPBDNS058038	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS058040	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS060815	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
echinochloa_oryzicola_GWHPBDNS060987	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS061579	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS062125	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS062301	Alkaloid	STR	medium	pass	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS063620	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS064168	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS064169	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS064204	Alkaloid	STR	medium	pass	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS065103	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS065956	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR
echinochloa_oryzicola_GWHPBDNS067509	Alkaloid	STR	medium	pass	STR__00003__sp_Q9M1B4_SSL13_ARATH
echinochloa_oryzicola_GWHPBDNS068519	Alkaloid	STR	low	borderline	STR__00001__sp_D3GE74_STR1_MEDTR