PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS000228 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000229 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000231 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000338 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000719 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000829 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000830 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS000831 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000853 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS000857 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS001107 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS001354 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001356 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001357 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001385 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001391 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001570 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS001584 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS001797 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS001824 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS002040 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS002207 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS002322 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS002325 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS002494 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003174 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS003232 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003288 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003289 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003297 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS003299 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS003300 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS003327 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003348 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003589 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003600 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003602 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003606 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS003697 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS004016 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS004017 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS004018 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS004193 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS004621 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS005227 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS005389 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS005390 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS005472 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS005552 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS005671 Alkaloid T3O medium borderline