PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS005672 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS006658 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS007766 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS009054 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS009056 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS009057 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS009369 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS009373 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS009374 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS009392 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS010003 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010004 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010115 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010426 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010945 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010946 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS010964 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS011801 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS012300 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS012301 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS012340 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS012934 Alkaloid T3O high pass
echinochloa_oryzicola_GWHPBDNS012942 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS012943 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS014098 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS014229 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS014258 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS014361 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS014571 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS014687 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015103 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015595 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015598 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015799 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015800 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015899 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS015900 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS016037 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS016542 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS016812 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS016839 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS017075 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS017299 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS017923 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS017934 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS018422 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS018577 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS018578 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS018758 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS018861 Alkaloid T3O medium pass