PlantSME Plant secondary metabolism enzyme database

Echinochloa oryzicola (echinochloa_oryzicola)

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Imported from atlas release summary for Echinochloa oryzicola.

2857
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Common name
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Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 735 19 BAHD (329) View species results
Phenylpropanoid pathway 696 12 POD (326) View species results
Alkaloid pathway 626 23 7DLGT (78) View species results
Flavonoid pathway 326 14 UFGT (144) View species results
Rosmarinic acid pathway 311 7 C4H (166) View species results
Steroid pathway 163 13 SMT1/SMT2/SMT3 (71) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3572 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 665 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Gene Pathway Family Confidence Status
echinochloa_oryzicola_GWHPBDNS019052 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS019197 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS019458 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS019844 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS019856 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS019868 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS020080 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020325 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020407 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020410 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020484 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020849 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS020929 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS022204 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS022895 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023011 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023012 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023013 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023014 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023015 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023017 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023311 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023709 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS023968 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023974 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS023976 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS024344 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS025152 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS025153 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS026086 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS027004 Alkaloid T3O low borderline
echinochloa_oryzicola_GWHPBDNS027162 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS027953 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS028152 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS028161 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS028162 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS028235 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS029014 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS029025 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS029785 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS029921 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS029964 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS029965 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS029967 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS030001 Alkaloid T3O medium pass
echinochloa_oryzicola_GWHPBDNS030478 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS030685 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS030687 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS030691 Alkaloid T3O medium borderline
echinochloa_oryzicola_GWHPBDNS030721 Alkaloid T3O medium borderline