PlantSME Plant secondary metabolism enzyme database

Fissidens javanicus (fissidens_javanicus)

Imported from atlas release summary for Fissidens javanicus.

686
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (92) View species results
Terpenoid pathway 169 18 BAHD (72) View species results
Alkaloid pathway 136 16 PYKS (27) View species results
Flavonoid pathway 93 10 CHS (28) View species results
Rosmarinic acid pathway 69 7 C4H (25) View species results
Steroid pathway 36 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 666 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 145 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Fjavscaffold_10002400 Flavonoid F3H low borderline
Fjavscaffold_100026660 Flavonoid F3H medium borderline
Fjavscaffold_100038510 Flavonoid F3H medium borderline
Fjavscaffold_100038520 Flavonoid F3H medium borderline
Fjavscaffold_10003870 Flavonoid F3H low borderline
Fjavscaffold_10003920 Flavonoid F3H medium borderline
Fjavscaffold_100046260 Flavonoid F3H medium borderline
Fjavscaffold_100046280 Flavonoid F3H low borderline
Fjavscaffold_100046310 Flavonoid F3H low borderline
Fjavscaffold_10014290 Flavonoid F3H medium borderline
Fjavscaffold_10017940 Flavonoid F3H medium borderline
Fjavscaffold_10020090 Flavonoid F3H medium borderline
Fjavscaffold_120062160 Flavonoid F3H medium pass
Fjavscaffold_120064520 Flavonoid F3H low borderline
Fjavscaffold_120064530 Flavonoid F3H low borderline
Fjavscaffold_130067960 Flavonoid F3H medium borderline
Fjavscaffold_20092400 Flavonoid F3H medium borderline
Fjavscaffold_20100080 Flavonoid F3H medium borderline
Fjavscaffold_20103010 Flavonoid F3H medium borderline
Fjavscaffold_20112880 Flavonoid F3H medium borderline
Fjavscaffold_30124730 Flavonoid F3H medium borderline
Fjavscaffold_30127050 Flavonoid F3H low borderline
Fjavscaffold_30130970 Flavonoid F3H medium borderline
Fjavscaffold_30150370 Flavonoid F3H medium borderline
Fjavscaffold_40155250 Flavonoid F3H medium pass
Fjavscaffold_40155420 Flavonoid F3H medium borderline
Fjavscaffold_40159460 Flavonoid F3H medium borderline
Fjavscaffold_40161180 Flavonoid F3H medium borderline
Fjavscaffold_40161230 Flavonoid F3H low borderline
Fjavscaffold_40163070 Flavonoid F3H medium borderline
Fjavscaffold_40163870 Flavonoid F3H medium borderline
Fjavscaffold_50181100 Flavonoid F3H medium borderline
Fjavscaffold_50189960 Flavonoid F3H medium borderline
Fjavscaffold_50193170 Flavonoid F3H medium borderline
Fjavscaffold_50193240 Flavonoid F3H low borderline
Fjavscaffold_60215430 Flavonoid F3H medium borderline
Fjavscaffold_60218640 Flavonoid F3H medium borderline
Fjavscaffold_70222780 Flavonoid F3H medium borderline
Fjavscaffold_70224710 Flavonoid F3H medium borderline
Fjavscaffold_80241230 Flavonoid F3H medium borderline
Fjavscaffold_80244160 Flavonoid F3H medium pass
Fjavscaffold_80253100 Flavonoid F3H low borderline
Fjavscaffold_80255080 Flavonoid F3H medium borderline
Fjavscaffold_90266840 Flavonoid F3H medium pass