Fissidens javanicus (fissidens_javanicus)

This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.

Pathway Coverage

6 Pathways

Phenylpropanoid pathway 26.68% Terpenoid pathway 24.64% Alkaloid pathway 19.83% Flavonoid pathway 13.56% Rosmarinic acid pathway 10.06% Steroid pathway 5.25%

Family Distribution

686 Candidate Genes

C4H 6.18% BAHD 6.18% C3'H/CYP98A 6.13% POD 5.73% CYP76 4.54% 4CL 4.42% IFS 3.46% NMT 3.35%

Other Families 60.01%

More Families (95)

BR6OX2/CYP85A2 45 2.55% F3H 44 2.5% STR 43 2.44% T3O 40 2.27% PYKS 38 2.16% DWF4/CYP90B1 36 2.04% IFR 34 1.93% GS 32 1.82% CODM/T6ODM 31 1.76% UGT 31 1.76% CHS 29 1.64% 7DLGT 28 1.59% IO 28 1.59% F3'H/CYP75B 28 1.59% UFGT 27 1.53% PAL 27 1.53% LAC 21 1.19% SMT1/SMT2/SMT3 21 1.19% HCT 20 1.13% CAD 19 1.08% T16H 18 1.02% H6H 18 1.02% F3'5'H/CYP75A 17 0.96% RAS 16 0.91% CYP90D1 15 0.85% SLS 14 0.79% TRI/TRII 14 0.79% CYP71 14 0.79% FNS 13 0.74% COMT 13 0.74% CAS 11 0.62% G8O/G8H 10 0.57% SGD 9 0.51% 16OMT 9 0.51% TDC 9 0.51% CSE 9 0.51% F5H/CYP84A 9 0.51% 7DLH 8 0.45% NCS 8 0.45% LAMT 8 0.45% CNMT 8 0.45% ANR 8 0.45% COR 7 0.4% TAT 7 0.4% CPD/CYP90A1 7 0.4% CCR 6 0.34% CPR 6 0.34% AACT 6 0.34% PMT 5 0.28% CYP80B1 5 0.28% ADC 5 0.28% BBE 5 0.28% 8HGO 5 0.28% DFR 5 0.28% ROT3/CYP90C1 5 0.28% SQS/FDFT1 5 0.28% DET2 5 0.28% BR6OX1/CYP85A1 5 0.28% ISY 4 0.23% MPO 4 0.23% ANS/LDOX 4 0.23% HDS/IspG 4 0.23% GGPPS 4 0.23% CMK/IspE 4 0.23% FPPS 4 0.23% TYDC_DDC 3 0.17% CHI 3 0.17% FLS 3 0.17% SQE 3 0.17% DWF5 3 0.17% CPI1 3 0.17% DXS 3 0.17% MVK 3 0.17% MCT/IspD 3 0.17% TPS 3 0.17% MVD 3 0.17% 6OMT_4OMT_SOMT 2 0.11% CCoAOMT 2 0.11% HPPR 2 0.11% FK 2 0.11% SMO1/SMO2 2 0.11% CYP51G1 2 0.11% HMGS 2 0.11% MDS/IspF 2 0.11% DXR 2 0.11% CYP719 1 0.06% CYP80F1 1 0.06% GES 1 0.06% DWF1 1 0.06% DWF7 1 0.06% HYD1 1 0.06% HMGR 1 0.06% PMK 1 0.06% IDI 1 0.06% HDR/IspH 1 0.06%

Species Pathway Results

The links below show identification results for this species within each pathway, instead of opening the global pathway overview.

Pathway	Candidate Genes	Families	Top family	Results
Phenylpropanoid pathway	183	11	POD (92)	View species results
Terpenoid pathway	169	18	BAHD (72)	View species results
Alkaloid pathway	136	16	PYKS (27)	View species results
Flavonoid pathway	93	10	CHS (28)	View species results
Rosmarinic acid pathway	69	7	C4H (25)	View species results
Steroid pathway	36	12	CAS (10)	View species results

Broad Catalytic Groups

P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.

Catalytic group	Families	Candidate genes	Included families
P450/oxygenase	24	666	7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase	3	145	BAHD, HCT, RAS

Identification Result List

Search the public identification results for this species; click pathway or family legends above to narrow within this species.

Current family filter: SMT1/SMT2/SMT3

Gene	Pathway	Family	Confidence	Status	Best Target
Fjavscaffold_10021510	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_110047730	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_110048710	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_110052000	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Fjavscaffold_110053970	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_20094500	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00001__sp_H2E7T8_SMTL1_BOTBR
Fjavscaffold_20103950	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_20109780	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_30125830	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00004__sp_Q4VNK0_SMTA_BRAOT
Fjavscaffold_30147480	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Fjavscaffold_50176220	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Fjavscaffold_60209360	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00006__sp_Q9LM02_SMT1_ARATH
Fjavscaffold_80237750	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_80240230	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_80242400	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_80253220	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_90256490	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_90259160	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_90267900	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_90272350	Steroid	SMT1/SMT2/SMT3	medium	pass	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH
Fjavscaffold_90272510	Steroid	SMT1/SMT2/SMT3	low	borderline	SMT1_SMT2_SMT3__00005__sp_Q8RUW5_SCP8_ARATH