PlantSME Plant secondary metabolism enzyme database

Fissidens javanicus (fissidens_javanicus)

Imported from atlas release summary for Fissidens javanicus.

686
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (92) View species results
Terpenoid pathway 169 18 BAHD (72) View species results
Alkaloid pathway 136 16 PYKS (27) View species results
Flavonoid pathway 93 10 CHS (28) View species results
Rosmarinic acid pathway 69 7 C4H (25) View species results
Steroid pathway 36 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 666 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 145 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Gene Pathway Family Confidence Status
Fjavscaffold_80238350 Phenylpropanoid CAD medium borderline
Fjavscaffold_90264660 Phenylpropanoid CAD low borderline
Fjavscaffold_90264840 Phenylpropanoid CAD medium pass
Fjavscaffold_90266050 Phenylpropanoid CAD low borderline
Fjavscaffold_90272410 Phenylpropanoid CAD low borderline
Fjavscaffold_10015940 Phenylpropanoid CCR low borderline
Fjavscaffold_30118270 Phenylpropanoid CCR medium pass
Fjavscaffold_60203770 Phenylpropanoid CCR low borderline
Fjavscaffold_60207970 Phenylpropanoid CCR medium borderline
Fjavscaffold_70229220 Phenylpropanoid CCR medium borderline
Fjavscaffold_80250120 Phenylpropanoid CCR medium borderline
Fjavscaffold_20110450 Phenylpropanoid CCoAOMT medium pass
Fjavscaffold_70230790 Phenylpropanoid CCoAOMT medium pass
Fjavscaffold_100038370 Phenylpropanoid COMT medium pass
Fjavscaffold_10012990 Phenylpropanoid COMT medium pass
Fjavscaffold_20104300 Phenylpropanoid COMT medium pass
Fjavscaffold_20104340 Phenylpropanoid COMT medium pass
Fjavscaffold_20104360 Phenylpropanoid COMT medium pass
Fjavscaffold_20106540 Phenylpropanoid COMT low borderline
Fjavscaffold_30144020 Phenylpropanoid COMT low borderline
Fjavscaffold_40167230 Phenylpropanoid COMT medium pass
Fjavscaffold_40167640 Phenylpropanoid COMT medium pass
Fjavscaffold_60203650 Phenylpropanoid COMT low borderline
Fjavscaffold_60212470 Phenylpropanoid COMT medium pass
Fjavscaffold_80248420 Phenylpropanoid COMT medium pass
Fjavscaffold_90272550 Phenylpropanoid COMT medium pass
Fjavscaffold_100032460 Phenylpropanoid CSE medium pass
Fjavscaffold_110051550 Phenylpropanoid CSE medium pass
Fjavscaffold_120061700 Phenylpropanoid CSE medium pass
Fjavscaffold_20095240 Phenylpropanoid CSE medium pass
Fjavscaffold_40158370 Phenylpropanoid CSE low borderline
Fjavscaffold_50179560 Phenylpropanoid CSE medium pass
Fjavscaffold_50193880 Phenylpropanoid CSE medium pass
Fjavscaffold_70222350 Phenylpropanoid CSE medium pass
Fjavscaffold_80239870 Phenylpropanoid CSE medium pass
Fjavscaffold_50195360 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_60203020 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_60205460 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_60212190 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_70224660 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_70230330 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_80249610 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_80249620 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_90261340 Phenylpropanoid F5H/CYP84A medium borderline
Fjavscaffold_10013240 Phenylpropanoid HCT low borderline
Fjavscaffold_10015310 Phenylpropanoid HCT medium pass
Fjavscaffold_140073380 Phenylpropanoid HCT medium pass
Fjavscaffold_140073800 Phenylpropanoid HCT low borderline
Fjavscaffold_140074820 Phenylpropanoid HCT medium pass
Fjavscaffold_140075890 Phenylpropanoid HCT medium pass