PlantSME Plant secondary metabolism enzyme database

Fissidens javanicus (fissidens_javanicus)

Imported from atlas release summary for Fissidens javanicus.

686
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 183 11 POD (92) View species results
Terpenoid pathway 169 18 BAHD (72) View species results
Alkaloid pathway 136 16 PYKS (27) View species results
Flavonoid pathway 93 10 CHS (28) View species results
Rosmarinic acid pathway 69 7 C4H (25) View species results
Steroid pathway 36 12 CAS (10) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 666 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 145 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Gene Pathway Family Confidence Status
Fjavscaffold_80249350 Terpenoid CYP76 medium borderline
Fjavscaffold_80249610 Terpenoid CYP76 medium pass
Fjavscaffold_80249620 Terpenoid CYP76 medium pass
Fjavscaffold_90255790 Terpenoid CYP76 medium pass
Fjavscaffold_90257490 Terpenoid CYP76 medium borderline
Fjavscaffold_90257610 Terpenoid CYP76 medium pass
Fjavscaffold_90258110 Terpenoid CYP76 medium pass
Fjavscaffold_90258980 Terpenoid CYP76 low borderline
Fjavscaffold_90261340 Terpenoid CYP76 low borderline
Fjavscaffold_90261430 Terpenoid CYP76 low borderline
Fjavscaffold_90269300 Terpenoid CYP76 medium borderline
Fjavscaffold_90269320 Terpenoid CYP76 medium borderline
Fjavscaffold_90272030 Terpenoid CYP76 medium pass
Fjavscaffold_60205300 Terpenoid DXR high pass
Fjavscaffold_70227770 Terpenoid DXR high pass
Fjavscaffold_100026540 Terpenoid DXS medium pass
Fjavscaffold_100036820 Terpenoid DXS medium pass
Fjavscaffold_90272070 Terpenoid DXS low borderline
Fjavscaffold_190089640 Terpenoid FPPS low borderline
Fjavscaffold_30127550 Terpenoid FPPS medium pass
Fjavscaffold_30127570 Terpenoid FPPS medium pass
Fjavscaffold_70220840 Terpenoid FPPS medium pass
Fjavscaffold_100039840 Terpenoid GGPPS medium borderline
Fjavscaffold_100043940 Terpenoid GGPPS medium borderline
Fjavscaffold_10008440 Terpenoid GGPPS medium borderline
Fjavscaffold_40156060 Terpenoid GGPPS medium borderline
Fjavscaffold_70223950 Terpenoid HDR/IspH high pass
Fjavscaffold_100031510 Terpenoid HDS/IspG high pass
Fjavscaffold_120059740 Terpenoid HDS/IspG high pass
Fjavscaffold_50178770 Terpenoid HDS/IspG low borderline
Fjavscaffold_50184800 Terpenoid HDS/IspG low borderline
Fjavscaffold_110053310 Terpenoid HMGR medium pass
Fjavscaffold_10003230 Terpenoid HMGS high pass
Fjavscaffold_40160360 Terpenoid HMGS high pass
Fjavscaffold_30125980 Terpenoid IDI medium pass
Fjavscaffold_110047230 Terpenoid MCT/IspD high pass
Fjavscaffold_30127670 Terpenoid MCT/IspD high pass
Fjavscaffold_40163040 Terpenoid MCT/IspD low borderline
Fjavscaffold_20111190 Terpenoid MDS/IspF medium pass
Fjavscaffold_60212510 Terpenoid MDS/IspF high pass
Fjavscaffold_40167160 Terpenoid MVD medium pass
Fjavscaffold_80247980 Terpenoid MVD low borderline
Fjavscaffold_80248000 Terpenoid MVD low borderline
Fjavscaffold_10006090 Terpenoid MVK low borderline
Fjavscaffold_40155310 Terpenoid MVK low borderline
Fjavscaffold_50179590 Terpenoid MVK low borderline
Fjavscaffold_180084250 Terpenoid PMK medium pass
Fjavscaffold_40165910 Terpenoid TPS medium pass
Fjavscaffold_40165930 Terpenoid TPS medium pass
Fjavscaffold_60209280 Terpenoid TPS medium pass