PlantSME Plant secondary metabolism enzyme database

Fraxinus pennsylvanica (fraxinus_pennsylvanica)

Imported from atlas release summary for Fraxinus pennsylvanica.

2074
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 18 BAHD (235) View species results
Alkaloid pathway 476 22 7DLGT (97) View species results
Phenylpropanoid pathway 394 11 POD (155) View species results
Flavonoid pathway 283 12 UFGT (197) View species results
Steroid pathway 147 10 SMT1/SMT2/SMT3 (60) View species results
Rosmarinic acid pathway 122 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1552 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 358 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CPD/CYP90A1
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Gene Pathway Family Confidence Status
fraxinus_pennsylvanica_Fp_g11003 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g1241 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g12413 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g12704 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g12982 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g14850 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g15275 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g15276 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g15966 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g16120 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g19689 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g21564 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g28562 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g28642 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g29711 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g33692 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g34812 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g35891 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g36046 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g36734 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g37688 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g3908 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g39664 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g40760 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g41024 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g42655 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g48974 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g5869 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g647 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g736 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g8082 Steroid CPD/CYP90A1 low borderline
fraxinus_pennsylvanica_Fp_g9918 Steroid CPD/CYP90A1 medium borderline
fraxinus_pennsylvanica_Fp_g9921 Steroid CPD/CYP90A1 medium borderline