PlantSME Plant secondary metabolism enzyme database

Fraxinus pennsylvanica (fraxinus_pennsylvanica)

Imported from atlas release summary for Fraxinus pennsylvanica.

2074
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 18 BAHD (235) View species results
Alkaloid pathway 476 22 7DLGT (97) View species results
Phenylpropanoid pathway 394 11 POD (155) View species results
Flavonoid pathway 283 12 UFGT (197) View species results
Steroid pathway 147 10 SMT1/SMT2/SMT3 (60) View species results
Rosmarinic acid pathway 122 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1552 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 358 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: G8O/G8H
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Gene Pathway Family Confidence Status
fraxinus_pennsylvanica_Fp_g11788 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g14681 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g14746 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g15513 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g15596 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g17777 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g19431 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g19437 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g19463 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g20024 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g2042 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g2044 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g20652 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g20653 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g21629 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g24838 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g24843 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g24845 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g25145 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g25148 Alkaloid G8O/G8H low borderline
fraxinus_pennsylvanica_Fp_g25515 Alkaloid G8O/G8H low borderline
fraxinus_pennsylvanica_Fp_g26453 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g26455 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g2886 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g2956 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g29711 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g29714 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g33760 Alkaloid G8O/G8H low borderline
fraxinus_pennsylvanica_Fp_g35576 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g39237 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g3955 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g419 Alkaloid G8O/G8H medium pass
fraxinus_pennsylvanica_Fp_g43011 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g43841 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g49364 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g7839 Alkaloid G8O/G8H low borderline
fraxinus_pennsylvanica_Fp_g7842 Alkaloid G8O/G8H medium borderline
fraxinus_pennsylvanica_Fp_g8014 Alkaloid G8O/G8H low borderline