PlantSME Plant secondary metabolism enzyme database

Fraxinus pennsylvanica (fraxinus_pennsylvanica)

Imported from atlas release summary for Fraxinus pennsylvanica.

2074
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 652 18 BAHD (235) View species results
Alkaloid pathway 476 22 7DLGT (97) View species results
Phenylpropanoid pathway 394 11 POD (155) View species results
Flavonoid pathway 283 12 UFGT (197) View species results
Steroid pathway 147 10 SMT1/SMT2/SMT3 (60) View species results
Rosmarinic acid pathway 122 7 C4H (33) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1552 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 358 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TPS
Reset
Gene Pathway Family Confidence Status Best Target
fraxinus_pennsylvanica_Fp_g49798 Terpenoid TPS low borderline TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
fraxinus_pennsylvanica_Fp_g5501 Terpenoid TPS medium pass TPS__00033__sp_A0A2K9RFY0_TPS4_VITAC
fraxinus_pennsylvanica_Fp_g5569 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
fraxinus_pennsylvanica_Fp_g5571 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
fraxinus_pennsylvanica_Fp_g5576 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fraxinus_pennsylvanica_Fp_g5588 Terpenoid TPS medium pass TPS__00049__sp_A0A4Y5QZ62_T19BL_CANSA
fraxinus_pennsylvanica_Fp_g5589 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
fraxinus_pennsylvanica_Fp_g5590 Terpenoid TPS medium pass TPS__00047__sp_A0A4Y5QWA6_T18VF_CANSA
fraxinus_pennsylvanica_Fp_g5607 Terpenoid TPS medium pass TPS__00130__sp_J7LQ09_TPS7_PHYDL
fraxinus_pennsylvanica_Fp_g6096 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
fraxinus_pennsylvanica_Fp_g6127 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6132 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6133 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6137 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
fraxinus_pennsylvanica_Fp_g6146 Terpenoid TPS low borderline TPS__00119__sp_G8H5N3_TPS16_SOLLC
fraxinus_pennsylvanica_Fp_g6149 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
fraxinus_pennsylvanica_Fp_g6165 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
fraxinus_pennsylvanica_Fp_g6167 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6168 Terpenoid TPS medium pass TPS__00084__sp_E2E2N5_BCPSD_ORIVU
fraxinus_pennsylvanica_Fp_g6169 Terpenoid TPS medium pass TPS__00127__sp_J7LJN5_TPS6_PHYDL
fraxinus_pennsylvanica_Fp_g6171 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6400 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g6425 Terpenoid TPS medium pass TPS__00086__sp_E2E2N8_GCDS_ORIVU
fraxinus_pennsylvanica_Fp_g760 Terpenoid TPS medium pass TPS__00114__sp_G5CV45_TPS32_SOLLC
fraxinus_pennsylvanica_Fp_g9145 Terpenoid TPS medium pass TPS__00062__sp_B9T536_TPS10_RICCO